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IMGVR_UViG_3300021512_000027-3300021512-Ga0190303_10005805
Arc-VirIMGVR_UViG_3300021512_000027-3300021512-Ga0190303_10005805
Identity
- Kingdom:
- archaea
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 41.0 | 2.57e-01 | 70.7% | 22.8% |
| 1cjxA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 40.0 | 3.07e-01 | 70.7% | 81.3% |
| 1mpyA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 40.0 | 3.00e-01 | 70.7% | 79.9% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 48.0 | 3.66e-01 | 93.1% | 51.0% |
| 3qokA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 44.0 | 3.72e-01 | 82.8% | 59.8% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 45.0 | 3.72e-01 | 93.1% | 72.7% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 44.0 | 4.35e-01 | 87.9% | 88.5% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 39.0 | 2.46e-01 | 72.4% | 37.1% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 3.82e-01 | 96.6% | 57.1% |
| 4wsfA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 46.0 | 3.81e-01 | 98.3% | 77.5% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 4.07e-01 | 91.4% | 82.3% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 34.0 | 2.85e-01 | 74.1% | 33.3% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 41.0 | 4.13e-01 | 91.4% | 87.1% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 40.0 | 4.12e-01 | 100.0% | 92.6% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 37.0 | 3.21e-01 | 79.3% | 78.8% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.52 | 42.0 | 3.28e-01 | 94.8% | 93.9% |
| 4fd0A01 | 2.60.40.3630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.49e-01 | 79.3% | 91.1% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 38.0 | 3.81e-01 | 91.4% | 83.1% |
| 2ahoB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 41.0 | 3.74e-01 | 87.9% | 90.0% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.52 | 37.0 | 3.41e-01 | 75.9% | 64.0% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 37.0 | 3.27e-01 | 93.1% | 50.0% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 40.0 | 3.89e-01 | 87.9% | 76.1% |
| 2ls0101 | 2.40.50.670 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme | 0.52 | 38.0 | 3.28e-01 | 87.9% | 96.5% |
| 1zubA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 39.0 | 3.39e-01 | 91.4% | 85.3% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 41.0 | 3.66e-01 | 100.0% | 61.6% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 39.0 | 3.74e-01 | 98.3% | 73.2% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 39.0 | 3.85e-01 | 91.4% | 82.3% |
| 2vqeL00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 40.0 | 3.24e-01 | 91.4% | 67.7% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 39.0 | 3.71e-01 | 89.7% | 71.6% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 35.0 | 3.62e-01 | 93.1% | 80.4% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 40.0 | 4.05e-01 | 94.8% | 93.3% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.50 | 40.0 | 3.95e-01 | 96.6% | 90.5% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 39.0 | 3.81e-01 | 91.4% | 84.8% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 39.0 | 2.97e-01 | 93.1% | 70.7% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3241447 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 45.0 | 3.60e-01 | 87.9% | 34.2% |
| 4034031 | 4056.1.1.0 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein | 0.65 | 53.0 | 5.17e-01 | 96.6% | 89.2% |
| 3605879 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 40.0 | 4.34e-01 | 93.1% | 86.7% |
| 3931558 | 207.1.1.156 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PF27094 | 0.61 | 41.0 | 2.45e-01 | 70.7% | 21.6% |
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 4.55e-01 | 96.6% | 76.9% |
| 4993051 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.60 | 48.0 | 2.79e-01 | 87.9% | 58.7% |
| 3621734 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.59 | 44.0 | 3.53e-01 | 81.0% | 72.5% |
| 4119875 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.59 | 42.0 | 4.13e-01 | 98.3% | 69.2% |
| 3690375 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.59 | 48.0 | 3.80e-01 | 100.0% | 85.0% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 4.17e-01 | 91.4% | 68.6% |
| 4231809 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.58 | 49.0 | 2.88e-01 | 96.6% | 12.0% |
| 3997935 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.58 | 42.0 | 3.56e-01 | 81.0% | 77.1% |
| 4931822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 42.0 | 4.14e-01 | 96.6% | 72.3% |
| 4032923 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.57 | 47.0 | 3.02e-01 | 100.0% | 79.1% |
| 4456732 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.57 | 41.0 | 3.75e-01 | 96.6% | 57.5% |
| 4349950 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.56 | 40.0 | 4.01e-01 | 96.6% | 75.0% |
| 3866247 | 252.1.1.1 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD | 0.56 | 38.0 | 3.65e-01 | 72.4% | 67.1% |
| 5066039 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.56 | 48.0 | 2.82e-01 | 96.6% | 11.6% |
| 2324016 | 601.52.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Flagellar hook-associated protein 1 helical domain › Flagellar hook-associated protein 1 helical domain › FlgK_D1 | 0.55 | 44.0 | 2.89e-01 | 89.7% | 44.5% |
| 5011439 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.55 | 43.0 | 3.36e-01 | 91.4% | 64.8% |
| 3510346 | 209.1.1.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › C-type lectin-like | 0.55 | 37.0 | 2.92e-01 | 77.6% | 31.5% |
| 3941152 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.55 | 42.0 | 4.15e-01 | 93.1% | 80.0% |
| 4364271 | 325.1.7.14 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RPOC_hybrid | 0.55 | 38.0 | 3.27e-01 | 74.1% | 67.0% |
| 4014812 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.55 | 44.0 | 4.43e-01 | 93.1% | 93.3% |
| 4077485 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 42.0 | 4.07e-01 | 91.4% | 76.9% |
| 3767975 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.54 | 45.0 | 3.77e-01 | 100.0% | 74.5% |
| 3704921 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 44.0 | 3.40e-01 | 100.0% | 72.3% |
| None | — | 0.54 | 44.0 | 2.82e-01 | 100.0% | 77.7% | |
| 4966163 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 40.0 | 3.77e-01 | 91.4% | 65.3% |
| 3478898 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 38.0 | 3.78e-01 | 98.3% | 72.3% |
| 5062120 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 43.0 | 3.74e-01 | 100.0% | 68.6% |
| 3573585 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.53 | 38.0 | 3.93e-01 | 81.0% | 88.9% |
| 4376886 | 4.1.1.241 ↗ | beta barrels › SH3 › SH3 › SH3 › NifZ | 0.53 | 41.0 | 3.81e-01 | 91.4% | 81.2% |
| 4435672 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 39.0 | 3.87e-01 | 91.4% | 75.4% |
| 5052257 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.75e-01 | 89.7% | 76.7% |
| 3577387 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.52 | 38.0 | 3.12e-01 | 79.3% | 83.5% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.52 | 40.0 | 3.94e-01 | 91.4% | 78.5% |
| 4268386 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.65e-01 | 98.3% | 68.6% |
| 3205074 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 35.0 | 3.67e-01 | 87.9% | 86.0% |
| 5059830 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.51 | 42.0 | 3.72e-01 | 96.6% | 75.6% |
| 3841524 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.51 | 40.0 | 3.49e-01 | 100.0% | 60.9% |
| 4888509 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.50 | 42.0 | 2.92e-01 | 100.0% | 68.1% |