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IMGVR_UViG_3300021513_000090-3300021513-Ga0190315_100025335

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300021513_000090-3300021513-Ga0190315_100025335 ↗
Kingdom:: archaea

Quality

63.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-65

PDB

D2 high residues 80-126

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ol4A02	1.10.10.2390	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.77	52.0	4.87e-01	74.5%	56.7%
1bh9B00	1.10.20.10	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A	0.75	59.0	4.85e-01	89.4%	61.8%
2ac2A01	3.40.50.1400	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.75	54.0	3.68e-01	80.9%	22.3%
3t6pA02	1.10.8.10	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain	0.72	54.0	4.99e-01	87.2%	65.2%
1af7A01	1.10.155.10	Mainly Alpha › Orthogonal Bundle › Chemotaxis Receptor Methyltransferase Cher; domain 1 › Chemotaxis receptor methyltransferase CheR, N-terminal domain	0.67	47.0	4.03e-01	76.6%	47.5%
3kfuG01	1.10.20.60	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain	0.66	47.0	5.03e-01	80.9%	97.4%
3hi0A01	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.64	46.0	3.42e-01	76.6%	55.6%
3d0kB00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.63	44.0	2.65e-01	72.3%	27.0%
5deqB02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	42.0	3.62e-01	74.5%	66.3%
2mxdA00	1.10.260.110	Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) ›	0.58	40.0	3.66e-01	72.3%	56.5%
4xxiA00	1.10.490.20	Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins	0.58	45.0	3.30e-01	89.4%	57.8%
2x8xX02	3.10.20.310	Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac	0.57	41.0	3.54e-01	76.6%	63.2%
2hoxA02	3.40.640.10	Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain)	0.56	47.0	3.17e-01	100.0%	98.1%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3477670	190.1.1.0 ↗	alpha arrays › HMG-box-like › HMG-box › HMG-box	0.78	56.0	5.04e-01	76.6%	55.4%
3963537	3435.1.1.1 ↗	a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC	0.72	52.0	3.20e-01	83.0%	12.4%
5051518	1075.5.1.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter	0.62	50.0	3.12e-01	93.6%	22.5%
3553443	226.1.1.1 ↗	a+b two layers › POZ domain › POZ domain › POZ domain › BTB	0.61	43.0	3.14e-01	74.5%	55.2%
3809086	616.1.1.0 ↗	alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain	0.60	43.0	3.66e-01	76.6%	55.3%
3976839	5069.1.3.0 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits	0.58	44.0	3.62e-01	91.5%	90.0%
3590892	4070.1.1.2 ↗	alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50	0.57	48.0	3.12e-01	100.0%	90.8%