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IMGVR_UViG_3300021513_000090-3300021513-Ga0190315_10002534
Arc-VirIMGVR_UViG_3300021513_000090-3300021513-Ga0190315_10002534
Identity
- Kingdom:
- archaea
Quality
75.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-84
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16250.11 best | DUF4907 | 31.4 | 1.90e-07 | 80.5% | 83.6% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 42.0 | 3.87e-01 | 74.4% | 66.7% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.58 | 45.0 | 3.44e-01 | 84.1% | 57.4% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.57 | 36.0 | 4.09e-01 | 100.0% | 85.5% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.56 | 31.0 | 3.87e-01 | 96.3% | 93.5% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 38.0 | 3.86e-01 | 70.7% | 72.2% |
| 2iv2X01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.55 | 35.0 | 4.10e-01 | 100.0% | 94.5% |
| 4fvkA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 39.0 | 2.55e-01 | 74.4% | 32.4% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 37.0 | 3.09e-01 | 72.0% | 41.2% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.53 | 42.0 | 3.54e-01 | 86.6% | 52.9% |
| 3jamg01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 35.0 | 2.42e-01 | 70.7% | 22.9% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 2.75e-01 | 100.0% | 36.2% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.50 | 34.0 | 2.99e-01 | 72.0% | 51.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4985746 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.70 | 43.0 | 3.97e-01 | 73.2% | 47.6% |
| 3968468 | 4152.2.1.0 ↗ | a+b two layers › Shew3726-like › Uncharacterized protein CV_2116 › Uncharacterized protein CV_2116 | 0.66 | 48.0 | 5.00e-01 | 75.6% | 88.0% |
| 4961481 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.64 | 49.0 | 5.21e-01 | 80.5% | 95.7% |
| 5083173 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.63 | 46.0 | 3.20e-01 | 87.8% | 22.0% |
| 4948155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 40.0 | 3.47e-01 | 70.7% | 40.8% |
| 3387550 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.62 | 35.0 | 4.23e-01 | 100.0% | 90.0% |
| 3930408 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.62 | 42.0 | 4.31e-01 | 70.7% | 78.8% |
| 3926618 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.60 | 39.0 | 3.46e-01 | 70.7% | 45.8% |
| 1685513 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.60 | 34.0 | 4.05e-01 | 100.0% | 88.2% |
| 3982692 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.60 | 33.0 | 3.76e-01 | 100.0% | 73.3% |
| 1770995 | 223.2.1.8 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin | 0.59 | 42.0 | 3.15e-01 | 78.0% | 30.2% |
| 5021465 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 45.0 | 3.16e-01 | 90.2% | 24.7% |
| 1686589 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.59 | 33.0 | 3.98e-01 | 100.0% | 86.5% |
| 3483861 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.58 | 34.0 | 3.51e-01 | 100.0% | 58.7% |
| 3750853 | 330.1.1.18 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 | 0.58 | 45.0 | 4.01e-01 | 84.1% | 66.7% |
| 3173088 | 223.2.1.19 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_1 | 0.58 | 46.0 | 3.72e-01 | 86.6% | 52.5% |
| 3839189 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.58 | 33.0 | 4.04e-01 | 100.0% | 100.0% |
| 5077660 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 44.0 | 3.67e-01 | 85.4% | 54.0% |
| 5051613 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 43.0 | 3.85e-01 | 82.9% | 61.9% |
| 3953046 | 1001.1.1.4 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdopterin_N | 0.56 | 31.0 | 3.77e-01 | 100.0% | 88.0% |
| 5061538 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 28.0 | 3.36e-01 | 82.9% | 72.7% |
| 152631 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.55 | 39.0 | 2.55e-01 | 74.4% | 32.4% |
| 4976967 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 41.0 | 3.41e-01 | 82.9% | 48.0% |
| 4264315 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.53 | 33.0 | 3.80e-01 | 100.0% | 88.3% |
| 4037823 | 11.1.4.15 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Mfa2 | 0.53 | 42.0 | 3.57e-01 | 86.6% | 71.1% |
| 4278706 | 1001.1.1.1 ↗ | a+b two layers › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Formate dehydrogenase/DMSO reductase, domain 1 › Molybdop_Fe4S4 | 0.52 | 34.0 | 3.83e-01 | 100.0% | 90.0% |
| 4281428 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.51 | 35.0 | 3.04e-01 | 100.0% | 44.6% |
| 3580415 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.51 | 37.0 | 2.51e-01 | 91.5% | 20.7% |
| 4034196 | 2484.2.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain › Methyltransf_1N | 0.50 | 36.0 | 3.78e-01 | 74.4% | 100.0% |
| 5037858 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.50 | 37.0 | 3.97e-01 | 100.0% | 90.0% |