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IMGVR_UViG_3300021513_000102-3300021513-Ga0190315_100054810

Arc-Vir

IMGVR_UViG_3300021513_000102-3300021513-Ga0190315_100054810

Quality

79.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-71
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.71 63.0 4.64e-01 100.0% 60.6%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.63e-01 100.0% 96.7%
1in4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.53e-01 98.6% 83.6%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.81e-01 98.6% 62.1%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.71e-01 98.6% 98.4%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.67 57.0 5.38e-01 97.1% 90.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 5.16e-01 98.6% 80.8%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.05e-01 98.6% 70.7%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 58.0 5.25e-01 100.0% 75.3%
4mqvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 5.43e-01 98.6% 96.9%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.02e-01 98.6% 71.4%
3dp7B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.06e-01 100.0% 71.0%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.92e-01 98.6% 71.3%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.64 52.0 4.43e-01 92.8% 80.8%
3bwgB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.46e-01 98.6% 97.1%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.19e-01 94.2% 86.7%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.26e-01 98.6% 50.0%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 4.92e-01 98.6% 73.4%
2hs5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 52.0 5.31e-01 100.0% 97.0%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 51.0 4.98e-01 97.1% 81.8%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.07e-01 97.1% 84.0%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 53.0 5.01e-01 98.6% 82.6%
4edgA01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.63 56.0 4.50e-01 100.0% 83.6%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.94e-01 100.0% 86.3%
1stzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.98e-01 100.0% 77.6%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 5.14e-01 97.1% 100.0%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 5.29e-01 98.6% 95.7%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.75e-01 97.1% 84.3%
2v9vA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 5.19e-01 100.0% 98.6%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.99e-01 98.6% 88.0%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 52.0 5.00e-01 98.6% 86.6%
3eetA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 5.08e-01 97.1% 98.5%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 4.66e-01 100.0% 74.7%
4h0eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 50.0 5.02e-01 98.6% 94.3%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 50.0 4.80e-01 97.1% 82.1%
1xdsB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 44.0 4.01e-01 100.0% 58.7%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.89e-01 95.7% 98.4%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 3.97e-01 98.6% 47.8%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 46.0 4.75e-01 98.6% 96.9%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.70e-01 97.1% 87.2%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.60e-01 98.6% 39.7%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.86e-01 97.1% 98.6%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 48.0 4.86e-01 98.6% 98.5%
3t5vA00 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 48.0 3.22e-01 98.6% 60.5%
6d92A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 44.0 3.11e-01 97.1% 25.4%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 45.0 4.25e-01 98.6% 77.6%
3k21A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 42.0 4.31e-01 98.6% 85.3%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 44.0 4.10e-01 98.6% 73.6%
3b3qA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 41.0 2.49e-01 95.7% 30.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3437866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 65.0 5.87e-01 100.0% 66.3%
3392391 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.76 68.0 6.61e-01 100.0% 90.7%
5050269 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 59.0 6.03e-01 94.2% 93.8%
4934323 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 5.28e-01 100.0% 61.0%
3998171 101.1.2.490 alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 0.72 62.0 6.09e-01 95.7% 98.7%
5035277 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 4.45e-01 100.0% 35.0%
5031834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 61.0 5.62e-01 100.0% 72.2%
5035948 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 6.07e-01 100.0% 87.5%
5043806 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 56.0 5.15e-01 97.1% 65.6%
4956461 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 63.0 5.96e-01 100.0% 88.0%
3704111 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 5.99e-01 100.0% 94.3%
3508184 101.1.2.103 alpha arrays › HTH › HTH › winged helix domain › SelB-wing_2 0.71 62.0 6.05e-01 100.0% 90.7%
5063747 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 4.62e-01 100.0% 41.9%
5044288 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 62.0 5.94e-01 100.0% 88.7%
3244076 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 56.0 5.67e-01 95.7% 87.1%
3895346 101.1.2.575 alpha arrays › HTH › HTH › winged helix domain › PF25894 0.71 62.0 5.36e-01 100.0% 92.7%
5048178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.75e-01 98.6% 83.7%
5039517 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 56.0 5.64e-01 97.1% 88.6%
3174392 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.83e-01 98.6% 92.5%
3166133 101.1.2.103 alpha arrays › HTH › HTH › winged helix domain › SelB-wing_2 0.70 60.0 6.02e-01 100.0% 97.1%
4990155 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.70 60.0 4.50e-01 100.0% 51.9%
5016964 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 6.00e-01 100.0% 97.1%
5022395 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.70 61.0 4.67e-01 100.0% 54.5%
3303349 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 51.0 5.42e-01 91.3% 91.7%
3224625 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.69 57.0 5.65e-01 100.0% 86.7%
3617979 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 5.82e-01 100.0% 90.7%
5035687 101.1.2.948 alpha arrays › HTH › HTH › winged helix domain › PF27297 0.69 58.0 5.08e-01 100.0% 62.9%
3580494 101.1.2.499 alpha arrays › HTH › HTH › winged helix domain › HTH_MCM7 0.68 59.0 5.90e-01 98.6% 97.1%
3924587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 59.0 5.82e-01 98.6% 90.7%
4424248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.60e-01 98.6% 92.5%
3252019 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 5.30e-01 98.6% 78.8%
3515490 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 58.0 5.68e-01 100.0% 92.0%
3986601 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.67 52.0 5.05e-01 97.1% 75.0%
143797 101.1.2.149 alpha arrays › HTH › HTH › winged helix domain › Costars 0.67 57.0 5.46e-01 97.1% 95.1%
5042509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 55.0 5.39e-01 100.0% 86.7%
3224707 101.1.2.97 alpha arrays › HTH › HTH › winged helix domain › RPA_C 0.66 59.0 5.68e-01 100.0% 89.7%
3941890 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.86e-01 100.0% 95.7%
3937849 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.66 56.0 5.40e-01 98.6% 90.0%
5079223 183.1.1.1 alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C 0.66 58.0 4.55e-01 98.6% 46.9%
4974839 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 4.02e-01 98.6% 39.3%
3585425 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.66 56.0 5.13e-01 100.0% 95.8%
4123079 4168.1.1.0 alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.66 40.0 4.45e-01 100.0% 78.2%
3971896 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 56.0 5.41e-01 100.0% 90.0%
5065637 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.65 53.0 4.89e-01 100.0% 68.8%
5021436 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.00e-01 97.1% 80.0%
4987209 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.64 50.0 4.76e-01 100.0% 70.6%
4932334 314.1.1.3 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.63 54.0 3.29e-01 100.0% 14.2%
4679870 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 4.80e-01 100.0% 71.6%
3977991 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.62 52.0 4.92e-01 100.0% 78.8%
4129764 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.62 52.0 5.02e-01 98.6% 82.5%
4967060 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.72e-01 94.2% 78.8%
4956464 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 4.82e-01 98.6% 80.0%
3164370 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.60 52.0 4.92e-01 100.0% 82.4%
3976628 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.60 49.0 4.82e-01 100.0% 88.0%
1175673 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.58 48.0 4.70e-01 97.1% 87.2%
4418052 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 4.77e-01 98.6% 89.3%
2329747 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 4.62e-01 100.0% 75.0%
4030863 101.1.2.6 alpha arrays › HTH › HTH › winged helix domain › GntR 0.56 47.0 4.60e-01 100.0% 90.7%