←Back to structures
IMGVR_UViG_3300021513_000130-3300021513-Ga0190315_10005986
Arc-VirIMGVR_UViG_3300021513_000130-3300021513-Ga0190315_10005986
Identity
- Kingdom:
- archaea
Quality
84.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 57-104
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hczA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.78 | 50.0 | 4.67e-01 | 77.1% | 54.2% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.74 | 47.0 | 4.86e-01 | 91.7% | 68.9% |
| 1f3zA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.69 | 61.0 | 4.28e-01 | 100.0% | 51.3% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.69 | 57.0 | 4.12e-01 | 100.0% | 32.6% |
| 1w99A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.68 | 50.0 | 3.41e-01 | 81.2% | 25.0% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.68 | 55.0 | 3.90e-01 | 100.0% | 29.5% |
| 6u5uG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.68 | 60.0 | 4.36e-01 | 100.0% | 37.9% |
| 2zxqA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.66 | 59.0 | 3.98e-01 | 100.0% | 37.5% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 48.0 | 3.53e-01 | 100.0% | 27.8% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 42.0 | 3.97e-01 | 85.4% | 50.8% |
| 2uvaG07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.64 | 57.0 | 4.10e-01 | 100.0% | 37.5% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 55.0 | 3.92e-01 | 95.8% | 39.4% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.64 | 43.0 | 3.88e-01 | 72.9% | 72.6% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.63 | 51.0 | 3.83e-01 | 100.0% | 35.2% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.63 | 41.0 | 3.55e-01 | 85.4% | 40.2% |
| 3zqsA02 | 3.10.110.20 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › RWD domain-like | 0.62 | 51.0 | 4.06e-01 | 100.0% | 44.9% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 50.0 | 3.65e-01 | 97.9% | 40.3% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.62 | 53.0 | 5.28e-01 | 100.0% | 96.1% |
| 3s6pA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.61 | 53.0 | 3.86e-01 | 100.0% | 43.7% |
| 4nreA01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.60 | 50.0 | 3.77e-01 | 93.8% | 97.5% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 52.0 | 3.11e-01 | 97.9% | 24.1% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 41.0 | 4.38e-01 | 85.4% | 94.6% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 49.0 | 4.52e-01 | 97.9% | 71.4% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.59 | 49.0 | 3.67e-01 | 100.0% | 37.4% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.59 | 43.0 | 3.74e-01 | 100.0% | 50.6% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.58 | 46.0 | 3.29e-01 | 91.7% | 41.9% |
| 1zsqA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 46.0 | 3.64e-01 | 100.0% | 42.6% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.58 | 49.0 | 3.61e-01 | 100.0% | 76.6% |
| 8gn6A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 50.0 | 3.02e-01 | 100.0% | 92.4% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 36.0 | 3.25e-01 | 83.3% | 44.8% |
| 8gj8A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.04e-01 | 100.0% | 81.6% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.08e-01 | 100.0% | 50.0% |
| 1wthA02 | 3.10.450.190 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 40.0 | 3.33e-01 | 100.0% | 39.2% |
| 4u3vA00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.56 | 48.0 | 3.10e-01 | 100.0% | 40.9% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.56 | 41.0 | 3.46e-01 | 100.0% | 44.4% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 45.0 | 4.19e-01 | 95.8% | 70.8% |
| 4w82A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.55 | 46.0 | 3.36e-01 | 100.0% | 49.7% |
| 1i99I02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 42.0 | 3.21e-01 | 85.4% | 35.0% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 46.0 | 2.87e-01 | 100.0% | 17.4% |
| 3oulA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 45.0 | 2.98e-01 | 100.0% | 53.2% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 44.0 | 3.48e-01 | 93.8% | 73.8% |
| 3dghA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 3.40e-01 | 97.9% | 91.1% |
| 2x6hA02 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.52 | 44.0 | 3.17e-01 | 100.0% | 46.5% |
| 2zadA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 40.0 | 3.28e-01 | 100.0% | 88.6% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 41.0 | 3.29e-01 | 95.8% | 66.0% |
| 3v98B01 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.51 | 39.0 | 3.20e-01 | 100.0% | 91.5% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.50 | 40.0 | 3.37e-01 | 100.0% | 50.0% |
| 2i2lA01 | 2.10.70.50 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.50 | 43.0 | 4.19e-01 | 95.8% | 88.5% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3853086 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.77 | 58.0 | 3.39e-01 | 100.0% | 10.9% |
| 1512998 | 3953.1.1.1 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N | 0.76 | 59.0 | 4.88e-01 | 100.0% | 48.2% |
| 3536554 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.73 | 64.0 | 5.04e-01 | 100.0% | 48.4% |
| 3766391 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.73 | 64.0 | 4.36e-01 | 100.0% | 28.7% |
| 3369818 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.71 | 45.0 | 4.12e-01 | 85.4% | 47.7% |
| 3649906 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.70 | 46.0 | 3.71e-01 | 97.9% | 34.7% |
| 3931922 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.70 | 52.0 | 3.08e-01 | 100.0% | 10.1% |
| 5032559 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.67 | 54.0 | 4.42e-01 | 100.0% | 47.8% |
| 4209885 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.67 | 55.0 | 3.86e-01 | 97.9% | 29.3% |
| 3496522 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.67 | 52.0 | 2.94e-01 | 100.0% | 8.3% |
| 3215596 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.66 | 50.0 | 3.18e-01 | 100.0% | 15.9% |
| 3308424 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.66 | 52.0 | 3.80e-01 | 100.0% | 30.7% |
| 3662916 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.65 | 49.0 | 3.62e-01 | 100.0% | 29.0% |
| 3811580 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.64 | 50.0 | 3.69e-01 | 100.0% | 30.7% |
| 4311698 | 241.2.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › PF26204 | 0.64 | 50.0 | 3.92e-01 | 100.0% | 39.1% |
| 3474310 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.63 | 47.0 | 3.63e-01 | 100.0% | 35.5% |
| 4980908 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 53.0 | 3.77e-01 | 97.9% | 89.0% |
| 3930177 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.63 | 53.0 | 3.25e-01 | 100.0% | 59.7% |
| 3952333 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.62 | 54.0 | 4.86e-01 | 100.0% | 70.8% |
| 3254907 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 53.0 | 3.14e-01 | 100.0% | 12.1% |
| 5050831 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 51.0 | 3.67e-01 | 95.8% | 94.7% |
| 3761776 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 51.0 | 2.99e-01 | 100.0% | 13.3% |
| 3680919 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 52.0 | 3.97e-01 | 97.9% | 40.0% |
| 5031001 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.60 | 49.0 | 3.49e-01 | 95.8% | 88.4% |
| 4138663 | 4099.1.1.3 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 | 0.58 | 45.0 | 4.12e-01 | 93.8% | 64.6% |
| 3505004 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 43.0 | 3.63e-01 | 95.8% | 45.6% |
| 4673289 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.56 | 45.0 | 3.22e-01 | 100.0% | 92.6% |
| 3435721 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.56 | 42.0 | 3.41e-01 | 89.6% | 40.0% |
| 3267765 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.55 | 45.0 | 3.62e-01 | 100.0% | 50.9% |
| 3628254 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 2.93e-01 | 100.0% | 22.8% |
| 3984933 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.55 | 44.0 | 3.64e-01 | 89.6% | 75.6% |
| 136649 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.55 | 44.0 | 3.61e-01 | 93.8% | 72.6% |
| 3702171 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 47.0 | 3.22e-01 | 100.0% | 34.3% |
| 3423399 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.53 | 41.0 | 3.37e-01 | 93.8% | 42.1% |
| 3469191 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.53 | 46.0 | 3.32e-01 | 100.0% | 97.1% |