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IMGVR_UViG_3300021540_000078-3300021540-Ga0214517_10031811
Arc-VirIMGVR_UViG_3300021540_000078-3300021540-Ga0214517_10031811
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 503-678
Domain cluster:
rep: CAKLQF020000026.1__CAH1092387.1__SAMEA5780031_03519__00001__D3-168
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05362.20 best | Lon_C | 40.0 | 4.50e-10 | 94.3% | 76.6% |
D2
medium
residues 19-165
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20442.4 best | BrxL_N | 148.7 | 1.30e-43 | 87.1% | 97.0% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 43.0 | 4.51e-01 | 98.6% | 88.1% |
| 1jb7A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 43.0 | 4.09e-01 | 87.1% | 97.0% |
| 2jx8A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 17.0 | 2.68e-01 | 70.7% | 76.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4317833 | 2.1.1.264 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BrxL_N | 0.93 | 79.0 | 8.47e-01 | 87.8% | 99.2% |
| 4955328 | 2.1.1.264 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › BrxL_N | 0.83 | 72.0 | 7.50e-01 | 89.8% | 97.8% |
| 5026160 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 46.0 | 5.20e-01 | 88.4% | 91.8% |
| 4965400 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 46.0 | 5.00e-01 | 89.1% | 85.8% |
| 4984946 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 45.0 | 5.04e-01 | 89.1% | 88.7% |
| 4458313 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.66 | 43.0 | 5.03e-01 | 80.3% | 93.3% |
| 4454256 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.62 | 44.0 | 4.48e-01 | 85.7% | 73.8% |
| 4974931 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 45.0 | 4.86e-01 | 87.8% | 93.3% |
| 4045758 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.06e-01 | 82.3% | 84.2% |
| 4169774 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 42.0 | 4.05e-01 | 87.1% | 98.2% |
D3
medium
residues 194-221_394-491
Domain cluster:
rep: CAKLQF020000035.1__CAH1095866.1__SAMEA5780031_03936__00001__D391-488
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13337.13 best | BrxL_ATPase | 86.7 | 1.90e-24 | 62.7% | 24.9% |
| PF13337.13 | BrxL_ATPase | 27.1 | 2.50e-06 | 26.2% | 9.6% |
D4
medium
residues 222-393
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13337.13 best | BrxL_ATPase | 293.0 | 3.00e-87 | 100.0% | 54.3% |