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IMGVR_UViG_3300021540_000078-3300021540-Ga0214517_1003185

Arc-Vir

IMGVR_UViG_3300021540_000078-3300021540-Ga0214517_1003185

Quality

95.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-80
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08849.18 best BrxA 47.6 2.30e-12 100.0% 32.6%
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bhwA00 1.10.3540.10 Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain 0.87 74.0 5.25e-01 100.0% 33.0%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 53.0 5.93e-01 90.8% 100.0%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.71 53.0 5.46e-01 83.1% 86.9%
1yqgA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.70 51.0 4.23e-01 76.9% 50.4%
2dg7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.66 55.0 4.01e-01 93.8% 49.5%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.63 49.0 3.48e-01 87.7% 31.6%
4uiqB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 47.0 3.67e-01 83.1% 81.7%
1sxjB03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.63 46.0 4.13e-01 78.5% 71.7%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 5.10e-01 89.2% 98.4%
2uuzB00 1.10.10.2020 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Host-nuclease inhibitor protein Gam 0.61 43.0 3.91e-01 72.3% 60.0%
2hyjA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.61 47.0 3.67e-01 86.2% 70.1%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.59 43.0 4.25e-01 78.5% 72.5%
1l9lA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.59 51.0 4.91e-01 100.0% 94.6%
1m6nA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.59 43.0 3.45e-01 80.0% 55.6%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.58 45.0 4.10e-01 84.6% 82.8%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.58 42.0 4.03e-01 78.5% 72.4%
3l9tA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.57 40.0 3.40e-01 83.1% 41.5%
1i36A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 47.0 4.15e-01 93.8% 89.9%
2olvB02 1.10.3810.10 Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like 0.56 43.0 3.17e-01 86.2% 43.2%
4azsA03 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 41.0 3.21e-01 80.0% 48.6%
4e6nA02 6.10.140.1010 Special › Helix non-globular › Helix Hairpins › 0.55 39.0 3.90e-01 73.8% 75.8%
3akjA02 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.55 43.0 3.07e-01 87.7% 69.7%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 40.0 2.83e-01 83.1% 25.0%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 41.0 3.09e-01 81.5% 51.9%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 40.0 2.92e-01 81.5% 97.5%
2zcuA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.54 47.0 3.94e-01 100.0% 91.3%
1cbyA00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.53 43.0 3.08e-01 95.4% 64.8%
3l4aA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 40.0 3.34e-01 83.1% 49.6%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.53 37.0 3.09e-01 73.8% 58.8%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 37.0 3.79e-01 73.8% 80.6%
3fp3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 36.0 2.88e-01 81.5% 34.1%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.53 36.0 3.08e-01 80.0% 42.0%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 40.0 3.42e-01 83.1% 78.2%
4doyA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 40.0 2.92e-01 83.1% 51.4%
1bccB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 42.0 3.22e-01 98.5% 76.2%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.52 36.0 3.51e-01 73.8% 85.3%
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.52 38.0 2.99e-01 78.5% 66.4%
1oxjA01 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.52 38.0 3.90e-01 78.5% 90.2%
3r0qA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.51 36.0 2.64e-01 76.9% 92.8%
1v9mA02 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.51 43.0 3.85e-01 100.0% 78.2%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.51 36.0 2.71e-01 73.8% 29.8%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 37.0 3.22e-01 78.5% 70.2%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.51 34.0 3.44e-01 70.8% 71.6%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 29.0 3.05e-01 93.8% 57.4%
3mggA02 6.10.140.1580 Special › Helix non-globular › Helix Hairpins › 0.51 40.0 3.72e-01 92.3% 91.0%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.50 35.0 3.34e-01 73.8% 71.4%
2clbA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 42.0 3.28e-01 100.0% 68.6%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954653 101.1.1.45 alpha arrays › HTH › HTH › Three-helical HTH › BrxA 0.97 83.0 8.06e-01 89.2% 82.9%
4297679 101.1.1.45 alpha arrays › HTH › HTH › Three-helical HTH › BrxA 0.93 80.0 8.01e-01 90.8% 90.8%
3588086 101.1.1.45 alpha arrays › HTH › HTH › Three-helical HTH › BrxA 0.88 76.0 7.66e-01 93.8% 93.8%
4381449 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 6.84e-01 98.5% 95.7%
4437630 3705.1.1.0 alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) 0.78 69.0 6.75e-01 96.9% 94.3%
4179857 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.78 70.0 6.57e-01 100.0% 85.0%
5032990 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.76 66.0 6.54e-01 100.0% 92.9%
5057920 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.75 60.0 5.53e-01 87.7% 88.2%
4126690 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.75 50.0 5.35e-01 72.3% 81.8%
3708809 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 56.0 5.65e-01 80.0% 90.8%
3234099 101.1.1.75 alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 0.72 55.0 5.52e-01 93.8% 81.5%
3286823 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.71 51.0 4.20e-01 76.9% 45.8%
3313889 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 50.0 5.57e-01 87.7% 98.0%
3579249 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 5.06e-01 86.2% 80.0%
3685821 129.1.1.15 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.70 52.0 4.29e-01 78.5% 53.0%
4362811 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 51.0 5.50e-01 83.1% 96.4%
3198596 592.1.1.6 alpha arrays › PWI domain-like › PWI domain › PWI domain › Nab2 0.68 51.0 4.55e-01 81.5% 73.7%
4189431 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 5.49e-01 83.1% 98.2%
3781066 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.67 50.0 5.25e-01 84.6% 96.4%
3241469 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.63 44.0 4.68e-01 73.8% 98.2%
3673226 622.2.1.0 alpha bundles › YvfG-like › YvfG-like › YvfG-like 0.61 43.0 4.59e-01 84.6% 89.1%
3823524 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.61 43.0 3.55e-01 84.6% 40.0%
3714703 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.60 36.0 3.21e-01 75.4% 39.0%
3823956 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 46.0 3.46e-01 86.2% 63.9%
3598959 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 41.0 2.85e-01 83.1% 20.0%
4269573 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 44.0 3.85e-01 81.5% 89.5%
3892460 548.1.1.1 alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP 0.57 36.0 3.73e-01 72.3% 68.3%
4623986 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 41.0 2.83e-01 80.0% 29.2%
3734131 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.56 41.0 4.12e-01 78.5% 87.7%
3583564 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.56 45.0 4.47e-01 93.8% 94.3%
360221 509.1.1.3 alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › USH1C_N 0.56 40.0 3.80e-01 78.5% 95.0%
3510564 1128.1.1.0 alpha bundles › LYR protein › LYR protein › LYR protein 0.55 40.0 3.52e-01 80.0% 49.5%
3197455 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.55 40.0 3.92e-01 78.5% 82.9%
3393892 130.1.1.1 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.55 38.0 3.73e-01 72.3% 70.0%
3357962 109.4.1.1440 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, TPR_24 0.55 38.0 2.54e-01 80.0% 16.3%
3471120 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.55 40.0 4.02e-01 76.9% 89.2%
3698971 2007.2.3.4 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase2 0.54 46.0 3.35e-01 100.0% 44.5%
3391978 3812.1.1.0 alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE 0.51 36.0 3.48e-01 73.8% 68.0%
3315846 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.51 40.0 2.63e-01 90.8% 25.8%
3594136 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 38.0 2.51e-01 83.1% 20.0%
D2 high residues 94-176_186-197
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08849.18 best BrxA 94.9 7.30e-27 99.0% 48.4%
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bhwA00 1.10.3540.10 Mainly Alpha › Orthogonal Bundle › fold of a uncharacterized protein from magnetospirillum magneticum › uncharacterized protein from magnetospirillum magneticum domain 0.79 75.0 5.87e-01 100.0% 53.3%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 48.0 5.60e-01 83.2% 95.4%
1cf7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 57.0 6.04e-01 86.3% 96.3%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 48.0 5.48e-01 84.2% 95.5%
1lvaA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 45.0 5.38e-01 85.3% 100.0%
2fnaA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.83e-01 100.0% 100.0%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.67e-01 96.8% 96.1%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.66e-01 96.8% 94.9%
1r7jA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 5.03e-01 97.9% 76.7%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 5.47e-01 84.2% 87.4%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.69 49.0 5.46e-01 84.2% 100.0%
1y0uA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 45.0 4.69e-01 100.0% 71.9%
2v6eA04 1.10.10.2040 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 46.0 4.71e-01 82.1% 71.0%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 5.36e-01 95.8% 100.0%
1zybA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.68 49.0 3.73e-01 97.9% 32.3%
4a17H02 3.30.60.300 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.68 23.0 3.53e-01 72.6% 71.8%
2nriB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.83e-01 87.4% 75.0%
3go5A04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 44.0 5.30e-01 81.1% 100.0%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.73e-01 100.0% 96.6%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 5.30e-01 95.8% 97.1%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.37e-01 94.7% 95.0%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.28e-01 97.9% 83.7%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 5.52e-01 95.8% 95.2%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.66 54.0 4.68e-01 100.0% 57.0%
2fmyA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 5.66e-01 96.8% 100.0%
3e97A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 5.54e-01 94.7% 100.0%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 5.23e-01 80.0% 100.0%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.75e-01 97.9% 74.7%
2xubA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.90e-01 98.9% 80.4%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.60e-01 97.9% 76.7%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.45e-01 96.8% 58.9%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.72e-01 100.0% 81.7%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.35e-01 95.8% 97.5%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.01e-01 100.0% 48.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 5.35e-01 95.8% 100.0%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 5.08e-01 95.8% 86.2%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 54.0 5.27e-01 96.8% 87.4%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 49.0 5.20e-01 96.8% 95.3%
2pexA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.30e-01 96.8% 58.1%
1xmxA03 1.10.10.680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) 0.62 46.0 4.75e-01 100.0% 84.3%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.62 53.0 4.39e-01 97.9% 68.3%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.97e-01 95.8% 93.0%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 47.0 4.35e-01 97.9% 62.9%
2vlaA03 1.10.10.2090 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.61 53.0 4.91e-01 95.8% 95.0%
1wgwA00 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.61 44.0 4.34e-01 94.7% 72.7%
2sasA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 48.0 3.91e-01 88.4% 85.4%
7wboA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 49.0 4.03e-01 91.6% 90.6%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 44.0 4.56e-01 98.9% 85.4%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.59 52.0 3.98e-01 98.9% 88.3%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 53.0 5.19e-01 100.0% 100.0%
2scpA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 47.0 3.93e-01 90.5% 94.3%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.55 41.0 4.43e-01 85.3% 96.2%
3ulkA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 47.0 3.37e-01 97.9% 74.4%
1bjfA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 42.0 4.32e-01 90.5% 91.0%
4rflA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.53 38.0 3.07e-01 75.8% 92.5%
2f33A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 42.0 4.33e-01 95.8% 96.6%
1ux8A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 39.0 3.69e-01 82.1% 76.3%
1gd8A00 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.50 34.0 3.33e-01 97.9% 62.9%
6h9dA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.50 36.0 3.17e-01 75.8% 58.1%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954654 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.99 97.0 8.75e-01 100.0% 86.7%
3588087 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.98 94.0 8.49e-01 98.9% 85.8%
4419377 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.96 93.0 8.31e-01 100.0% 83.2%
2900282 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.88 83.0 7.49e-01 100.0% 82.4%
332620 101.1.2.99 alpha arrays › HTH › HTH › winged helix domain › BrxA 0.86 80.0 7.24e-01 100.0% 83.9%
3519165 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 62.0 6.58e-01 83.2% 90.6%
5013587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 6.10e-01 97.9% 100.0%
5073913 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 50.0 5.80e-01 98.9% 100.0%
3390278 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 50.0 5.80e-01 80.0% 100.0%
3500923 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.74 55.0 5.97e-01 84.2% 93.8%
3413561 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.73 53.0 5.11e-01 85.3% 67.6%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.73 52.0 5.63e-01 98.9% 88.7%
3362715 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 58.0 6.12e-01 84.2% 95.3%
4997427 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 54.0 5.55e-01 97.9% 82.2%
4960207 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.72 51.0 5.65e-01 80.0% 93.3%
3982788 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.72 47.0 5.26e-01 84.2% 88.6%
3554755 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 5.96e-01 81.1% 100.0%
5071333 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 46.0 4.55e-01 83.2% 61.6%
3404553 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 48.0 5.57e-01 80.0% 100.0%
3984604 7558.1.1.10 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › GPAT_C 0.72 59.0 5.94e-01 98.9% 89.5%
4938303 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 52.0 5.45e-01 97.9% 84.7%
4021477 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 55.0 5.74e-01 96.8% 90.6%
3401123 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.71 48.0 5.27e-01 82.1% 88.0%
3296161 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.25e-01 97.9% 64.6%
3356805 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.71 58.0 4.31e-01 97.9% 35.7%
3390907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 5.65e-01 93.7% 91.7%
4024039 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.89e-01 94.7% 89.5%
5034572 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.70 56.0 5.77e-01 98.9% 91.1%
3412839 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 51.0 5.62e-01 81.1% 98.7%
4560206 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.69 59.0 6.11e-01 98.9% 98.9%
3995560 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.55e-01 84.2% 90.0%
4940719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.76e-01 87.4% 58.2%
3033172 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 51.0 5.48e-01 87.4% 93.7%
4682562 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.69 57.0 4.55e-01 98.9% 45.9%
4050998 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.69 58.0 4.57e-01 98.9% 43.8%
197596 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 52.0 5.45e-01 97.9% 90.6%
3632795 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.68 59.0 5.62e-01 95.8% 92.7%
3228605 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.68 56.0 4.52e-01 100.0% 46.5%
4988748 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.67 53.0 5.48e-01 97.9% 90.0%
3581108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 58.0 5.36e-01 94.7% 78.3%
4600309 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.67 55.0 5.48e-01 98.9% 86.0%
1109319 101.1.2.142 alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 0.66 48.0 5.02e-01 97.9% 83.7%
5029501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 4.71e-01 87.4% 64.3%
3627131 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 58.0 5.51e-01 97.9% 95.7%
3870846 3745.1.1.1 alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.66 49.0 3.42e-01 78.9% 66.3%
4310372 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.66 59.0 4.76e-01 100.0% 96.2%
3857980 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.66 58.0 5.59e-01 98.9% 95.4%
3972365 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 59.0 4.76e-01 100.0% 95.1%
4558680 101.1.2.807 alpha arrays › HTH › HTH › winged helix domain › MC6 0.65 49.0 5.32e-01 82.1% 95.0%
5002881 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 5.03e-01 87.4% 80.0%
4107264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 5.46e-01 98.9% 85.2%
3943865 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 5.04e-01 93.7% 72.5%
5007356 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.65 58.0 3.99e-01 100.0% 83.0%
4950205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 58.0 5.57e-01 98.9% 90.9%
3786841 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.65 57.0 5.58e-01 97.9% 98.1%
3587524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 5.17e-01 87.4% 86.0%
4231800 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 54.0 5.50e-01 97.9% 93.7%
4071682 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.64 57.0 4.61e-01 100.0% 96.2%
4602598 101.1.2.147 alpha arrays › HTH › HTH › winged helix domain › ORC4_C 0.64 56.0 5.15e-01 97.9% 88.8%
3236801 101.1.2.555 alpha arrays › HTH › HTH › winged helix domain › PF29388 0.64 50.0 5.25e-01 85.3% 97.6%
3169051 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 50.0 5.03e-01 86.3% 84.2%
3187170 101.1.2.160 alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.63 43.0 4.68e-01 71.6% 100.0%
3861518 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.61 42.0 4.36e-01 80.0% 75.6%
4315754 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 43.0 4.33e-01 93.7% 72.6%
4997428 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.61 48.0 4.06e-01 97.9% 51.6%
1871577 101.1.2.129 alpha arrays › HTH › HTH › winged helix domain › BpuJI_N 0.61 52.0 4.49e-01 95.8% 74.5%
4429233 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.59 45.0 4.69e-01 82.1% 90.6%
3274420 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 4.65e-01 97.9% 72.3%
4940163 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 46.0 4.58e-01 100.0% 81.0%
3944996 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.59 46.0 4.96e-01 96.8% 100.0%
3610856 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 45.0 3.39e-01 95.8% 34.0%
4426232 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.57 48.0 4.94e-01 94.7% 97.8%
3547115 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.57 42.0 4.32e-01 89.5% 83.3%
3521681 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.56 42.0 4.29e-01 92.6% 83.3%
3917977 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.56 41.0 4.21e-01 94.7% 82.2%
4170809 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.56 44.0 4.54e-01 86.3% 93.3%
3911871 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.56 46.0 4.69e-01 100.0% 92.6%
4049391 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.56 41.0 4.13e-01 82.1% 78.9%
4361463 101.19.1.1 alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.55 45.0 4.47e-01 92.6% 85.0%
3932227 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 44.0 4.12e-01 87.4% 69.2%
4998704 1075.1.2.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.55 42.0 3.10e-01 85.3% 43.3%
4008532 164.1.1.1 alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 0.54 38.0 4.02e-01 86.3% 83.5%
3921258 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.54 40.0 4.15e-01 94.7% 85.6%
4032196 3447.1.1.0 alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) 0.53 39.0 3.17e-01 78.9% 99.0%
3392054 109.4.1.1784 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28344 0.51 38.0 2.23e-01 80.0% 14.4%
3501219 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.51 41.0 3.99e-01 93.7% 80.0%
5014283 3352.1.1.2 alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 0.51 44.0 2.93e-01 97.9% 41.3%
4029101 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 38.0 3.44e-01 85.3% 55.7%