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IMGVR_UViG_3300021541_000005-3300021541-Ga0214529_10004192
Arc-VirIMGVR_UViG_3300021541_000005-3300021541-Ga0214529_10004192
Identity
- Kingdom:
- archaea
Quality
67.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-141
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zfzD00 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.64 | 43.0 | 5.00e-01 | 88.8% | 100.0% |
| 2vs7A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 41.0 | 4.85e-01 | 92.2% | 96.2% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.63 | 45.0 | 3.85e-01 | 96.6% | 45.0% |
| 1svvB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 36.0 | 4.03e-01 | 71.6% | 75.0% |
| 2rjzA02 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.60 | 43.0 | 4.60e-01 | 75.0% | 96.0% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.59 | 47.0 | 3.89e-01 | 96.6% | 47.6% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.57 | 44.0 | 4.28e-01 | 82.8% | 85.9% |
| 3c0wA02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 44.0 | 4.65e-01 | 100.0% | 96.1% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.54 | 37.0 | 3.03e-01 | 71.6% | 89.5% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.54 | 34.0 | 3.89e-01 | 81.9% | 91.3% |
| 2r11D00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 36.0 | 2.74e-01 | 70.7% | 69.4% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 40.0 | 3.90e-01 | 82.8% | 88.0% |
| 3caiA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 37.0 | 3.53e-01 | 76.7% | 86.3% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4566109 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.67 | 48.0 | 5.20e-01 | 78.4% | 91.6% |
| 5022277 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.65 | 52.0 | 5.05e-01 | 86.2% | 99.2% |
| 4933755 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.63 | 51.0 | 5.05e-01 | 87.1% | 96.8% |
| 4080330 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.62 | 46.0 | 4.87e-01 | 96.6% | 89.0% |
| 4088598 | 242.1.1.6 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA | 0.62 | 43.0 | 4.52e-01 | 96.6% | 80.0% |
| 4059572 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.61 | 46.0 | 4.74e-01 | 98.3% | 83.6% |
| None | — | 0.60 | 43.0 | 4.65e-01 | 75.0% | 94.0% | |
| 4142447 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.60 | 44.0 | 4.71e-01 | 94.8% | 89.0% |
| 4127810 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.60 | 49.0 | 4.94e-01 | 99.1% | 86.7% |
| 4205746 | 242.1.1.5 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N | 0.60 | 45.0 | 4.74e-01 | 96.6% | 88.6% |
| 4997602 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 48.0 | 5.03e-01 | 92.2% | 96.2% |
| 4538250 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.59 | 52.0 | 4.98e-01 | 97.4% | 100.0% |
| 4941329 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.59 | 46.0 | 4.93e-01 | 97.4% | 99.0% |
| 4997781 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 46.0 | 4.77e-01 | 99.1% | 93.3% |
| 4929462 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.58 | 44.0 | 4.50e-01 | 84.5% | 81.7% |
| 5020278 | 3012.1.1.19 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › PF27313 | 0.58 | 44.0 | 4.45e-01 | 84.5% | 80.0% |
| 5072186 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.58 | 43.0 | 4.53e-01 | 97.4% | 86.7% |
| 2128076 | 310.3.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilO | 0.58 | 43.0 | 4.02e-01 | 77.6% | 68.8% |
| 3603683 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 50.0 | 4.65e-01 | 95.7% | 98.6% |
| 4629783 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 46.0 | 4.58e-01 | 97.4% | 84.2% |
| 4015536 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.57 | 45.0 | 3.86e-01 | 85.3% | 67.4% |
| 4978826 | 873.1.1.18 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 | 0.56 | 45.0 | 3.67e-01 | 86.2% | 50.2% |
| 4563127 | 310.3.1.3 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN | 0.56 | 39.0 | 4.05e-01 | 70.7% | 78.1% |
| 4993810 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 48.0 | 4.78e-01 | 98.3% | 90.8% |
| 4928823 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.53 | 41.0 | 4.08e-01 | 82.8% | 98.3% |
| 3582395 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 37.0 | 3.51e-01 | 71.6% | 64.4% |
| 1140585 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.52 | 36.0 | 2.74e-01 | 70.7% | 70.5% |
| 3989122 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.51 | 39.0 | 3.00e-01 | 81.9% | 86.4% |
| 4949592 | 873.1.1.22 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF25939 | 0.50 | 39.0 | 3.38e-01 | 85.3% | 58.5% |
| 4986012 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.50 | 40.0 | 3.31e-01 | 85.3% | 48.1% |
| 3709419 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.50 | 38.0 | 3.53e-01 | 80.2% | 94.7% |
| 4220833 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.50 | 38.0 | 2.95e-01 | 81.0% | 85.4% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 25.0 | 3.01e-01 | 75.0% | 70.3% |