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IMGVR_UViG_3300021587_000025-3300021587-Ga0190351_100000152
Arc-VirIMGVR_UViG_3300021587_000025-3300021587-Ga0190351_100000152
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-184
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dl8A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.75 | 44.0 | 3.20e-01 | 88.0% | 23.5% |
| 6eheA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.67 | 43.0 | 3.41e-01 | 87.3% | 33.8% |
| 1a0sP00 | 2.40.170.10 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type | 0.60 | 48.0 | 3.41e-01 | 91.1% | 31.2% |
| 1nqfA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 50.0 | 3.56e-01 | 96.2% | 34.5% |
| 1lshA04 | 2.20.80.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 | 0.56 | 50.0 | 4.16e-01 | 91.8% | 94.4% |
| 3efmA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 51.0 | 3.63e-01 | 96.8% | 37.4% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.54 | 50.0 | 3.30e-01 | 100.0% | 82.3% |
| 3ty1A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.54 | 49.0 | 3.71e-01 | 100.0% | 91.7% |
| 7btxA01 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.54 | 50.0 | 3.79e-01 | 97.5% | 58.2% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.53 | 39.0 | 3.57e-01 | 90.5% | 57.6% |
| 4c00A04 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.53 | 48.0 | 3.77e-01 | 96.2% | 54.1% |
| 1kmoA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 49.0 | 3.37e-01 | 100.0% | 88.1% |
| 6fokB01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.53 | 49.0 | 3.22e-01 | 100.0% | 85.2% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.53 | 44.0 | 4.53e-01 | 96.2% | 90.3% |
| 1ygaA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 47.0 | 3.69e-01 | 98.7% | 99.4% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.52 | 43.0 | 3.27e-01 | 88.6% | 44.1% |
| 3mwxA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.52 | 44.0 | 3.53e-01 | 93.0% | 95.3% |
| 3os7A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 44.0 | 3.49e-01 | 93.7% | 90.2% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 44.0 | 3.22e-01 | 89.9% | 39.6% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 31.0 | 3.35e-01 | 82.3% | 69.6% |
| 1pu4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 44.0 | 3.29e-01 | 94.3% | 89.9% |
| 1v7wA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.50 | 46.0 | 3.70e-01 | 100.0% | 85.8% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3992540 | 79.1.1.24 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Mlf1IP | 0.77 | 41.0 | 5.38e-01 | 86.7% | 89.5% |
| 3581297 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.74 | 40.0 | 3.55e-01 | 91.1% | 38.6% |
| 3644755 | 5084.5.1.23 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD | 0.74 | 43.0 | 3.33e-01 | 87.3% | 28.9% |
| 3391818 | 3070.2.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain | 0.73 | 40.0 | 5.05e-01 | 82.3% | 86.9% |
| 3512269 | 79.1.1.16 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF1983 | 0.73 | 36.0 | 4.81e-01 | 96.8% | 85.6% |
| 2141087 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.72 | 48.0 | 3.58e-01 | 88.0% | 30.0% |
| 4513489 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.71 | 48.0 | 3.58e-01 | 88.6% | 30.6% |
| 3608121 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.67 | 37.0 | 3.11e-01 | 91.1% | 32.6% |
| 3385986 | 5084.3.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta | 0.66 | 38.0 | 3.49e-01 | 87.3% | 44.4% |
| 4008544 | 5084.6.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx | 0.63 | 42.0 | 3.71e-01 | 90.5% | 46.7% |
| 4083193 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.63 | 48.0 | 3.23e-01 | 99.4% | 22.1% |
| 3981844 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 47.0 | 3.31e-01 | 91.1% | 27.8% |
| 3980825 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.61 | 47.0 | 3.31e-01 | 90.5% | 28.0% |
| 3395729 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 36.0 | 3.66e-01 | 86.7% | 58.7% |
| 3404731 | 5084.5.1.37 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C | 0.60 | 34.0 | 3.32e-01 | 89.9% | 47.8% |
| 3236032 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 53.0 | 3.53e-01 | 94.3% | 40.9% |
| 4338986 | 5084.5.3.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel | 0.59 | 53.0 | 3.68e-01 | 94.3% | 76.3% |
| 2392665 | 5084.1.1.12 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Porin_7 | 0.58 | 40.0 | 4.57e-01 | 98.1% | 94.8% |
| 3803010 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.58 | 50.0 | 4.12e-01 | 88.6% | 61.2% |
| 4652295 | 5084.5.1.52 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › SlpA_C | 0.57 | 51.0 | 3.29e-01 | 93.0% | 25.3% |
| 5047980 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.56 | 49.0 | 3.97e-01 | 94.9% | 85.2% |
| 3941832 | 5084.5.1.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB | 0.56 | 53.0 | 3.89e-01 | 100.0% | 71.6% |
| 3379458 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.56 | 44.0 | 3.41e-01 | 88.6% | 39.4% |
| 4349091 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.55 | 41.0 | 2.99e-01 | 90.5% | 29.3% |
| 3824904 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.55 | 50.0 | 3.77e-01 | 93.7% | 50.9% |
| 3526427 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.55 | 51.0 | 3.85e-01 | 97.5% | 58.4% |
| 2849910 | 5084.10.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD | 0.54 | 40.0 | 2.78e-01 | 94.3% | 22.9% |
| 3611705 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.53 | 48.0 | 3.62e-01 | 96.2% | 61.4% |
| 3594654 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.53 | 48.0 | 3.62e-01 | 96.2% | 61.1% |
| 3967717 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.53 | 49.0 | 3.80e-01 | 96.2% | 55.0% |
| 1760440 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.52 | 48.0 | 3.36e-01 | 100.0% | 88.2% |
| 4055728 | 5084.5.1.2 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 | 0.52 | 48.0 | 3.67e-01 | 96.8% | 56.8% |
| 4025861 | 4051.1.1.1 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B | 0.52 | 44.0 | 4.32e-01 | 95.6% | 82.9% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.52 | 42.0 | 4.12e-01 | 94.9% | 78.8% |
| 4668983 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.52 | 42.0 | 4.27e-01 | 96.2% | 85.6% |
| 3965708 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.51 | 45.0 | 3.90e-01 | 95.6% | 62.1% |
| 3601683 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.51 | 37.0 | 3.05e-01 | 92.4% | 39.1% |
| 3941401 | 5084.5.2.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB | 0.51 | 48.0 | 3.50e-01 | 100.0% | 65.1% |
| 4066147 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.51 | 46.0 | 3.59e-01 | 97.5% | 49.5% |
| 4622073 | 5084.5.4.5 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM | 0.50 | 46.0 | 3.61e-01 | 98.7% | 92.9% |
| 4484000 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.50 | 42.0 | 3.04e-01 | 92.4% | 32.0% |
| 3203571 | 9.13.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 | 0.50 | 37.0 | 3.88e-01 | 98.7% | 85.0% |
| 890 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.50 | 44.0 | 3.41e-01 | 93.7% | 69.7% |