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IMGVR_UViG_3300021587_000025-3300021587-Ga0190351_10000016

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300021587_000025-3300021587-Ga0190351_10000016 ↗
Kingdom:: archaea

Quality

51.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-141

PDB

D2 medium residues 142-172_231-358

PDB

D3 medium residues 419-516

PDB

Domain cluster: rep: OR354825.1__WNM51604.1__CoNPh2_CDS0050__00048__D273-380_559-584

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10145.15 best	PhageMin_Tail	38.8	1.40e-09	74.5%	34.8%

CATH (18)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4bemJ00	1.20.120.610	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase	0.61	44.0	3.63e-01	75.5%	65.2%
6o7uc01	1.20.120.610	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase	0.59	43.0	3.51e-01	76.5%	64.2%
1o9jC01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.58	52.0	3.67e-01	100.0%	59.5%
4i8qA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.58	51.0	3.66e-01	100.0%	60.6%
7w5lA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.57	50.0	3.77e-01	100.0%	62.6%
2hg2A01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.57	50.0	3.65e-01	100.0%	62.9%
1t90A01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.56	50.0	3.65e-01	100.0%	61.1%
3h4cA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.56	44.0	4.46e-01	83.7%	100.0%
3vz3A01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.56	49.0	3.66e-01	100.0%	64.6%
5vbfA01	3.40.605.10	Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1	0.56	49.0	3.56e-01	100.0%	59.7%
3b9qA01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.54	39.0	4.15e-01	87.8%	83.1%
1xaiA02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.54	40.0	3.34e-01	80.6%	98.4%
2hpsA00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.54	41.0	3.37e-01	82.7%	81.5%
6kd7A00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.53	43.0	3.04e-01	89.8%	56.9%
3nc3B00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.52	41.0	2.78e-01	85.7%	25.7%
1zp2A02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	44.0	4.24e-01	100.0%	82.1%
6gpxB00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.50	40.0	2.96e-01	85.7%	58.9%
5czcB01	3.40.366.10	Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2	0.50	43.0	3.39e-01	99.0%	57.7%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4032310	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.94	89.0	7.52e-01	100.0%	64.7%
3981280	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.90	84.0	7.24e-01	100.0%	67.6%
3941716	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.83	76.0	6.83e-01	99.0%	77.7%
4030882	159.1.2.6 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PhageMin_Tail	0.80	73.0	5.62e-01	100.0%	61.0%
3980709	103.4.1.27 ↗	alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › TMP_2	0.76	69.0	5.82e-01	100.0%	83.1%
3164789	159.1.2.5 ↗	alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › TMP_3	0.74	67.0	5.62e-01	100.0%	86.7%
4013940	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.67	58.0	5.63e-01	95.9%	95.5%
3391293	101.1.10.13 ↗	alpha arrays › HTH › HTH › Cyclin-like › DUF3452	0.63	46.0	4.29e-01	76.5%	95.8%
3957682	3352.1.1.15 ↗	alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87	0.62	47.0	3.38e-01	82.7%	92.1%
4950904	3896.1.2.0 ↗	alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-archaeol synthase	0.58	51.0	3.90e-01	96.9%	90.4%
3497513	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.54	44.0	4.25e-01	86.7%	99.1%
3743676	2498.1.1.113 ↗	mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › FKS1_dom1	0.54	48.0	3.45e-01	100.0%	50.2%
4010879	109.3.1.179 ↗	alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF7708	0.53	46.0	3.89e-01	98.0%	89.4%
4017733	3755.4.1.0 ↗	alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain	0.51	40.0	3.38e-01	83.7%	98.8%
4263052	5001.1.1.0 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like	0.51	41.0	3.22e-01	89.8%	59.6%

D4 medium residues 517-673

PDB

Domain cluster: rep: NC_003524.1__NP_612842.1__phi3626p13__00013__D344-469

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF10145.15 best	PhageMin_Tail	60.0	4.50e-16	80.9%	63.2%

D5 medium residues 855-942

PDB

D6 medium residues 975-1051

PDB

D7 medium residues 1105-1145_1165-1210

PDB

D8 medium residues 1146-1164_1211-1265

PDB