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IMGVR_UViG_3300021590_000003-3300021590-Ga0190354_100001341
Arc-VirIMGVR_UViG_3300021590_000003-3300021590-Ga0190354_100001341
Identity
- Kingdom:
- archaea
Quality
90.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-43
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d00A02 | 3.30.60.80 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.74 | 45.0 | 5.09e-01 | 88.1% | 86.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.68 | 47.0 | 3.17e-01 | 73.8% | 21.0% |
| 5fb0C01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 53.0 | 4.74e-01 | 97.6% | 65.6% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.64 | 44.0 | 3.51e-01 | 73.8% | 38.0% |
| 2jl8102 | 3.30.160.850 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 50.0 | 4.98e-01 | 95.2% | 91.1% |
| 2ewlA00 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 49.0 | 4.61e-01 | 100.0% | 82.1% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.60 | 41.0 | 4.33e-01 | 88.1% | 86.1% |
| 4uf0A03 | 2.10.110.20 | Mainly Beta › Ribbon › Cysteine Rich Protein › | 0.60 | 52.0 | 4.49e-01 | 97.6% | 72.3% |
| 2xzm500 | 3.30.1740.20 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Ribosomal protein S26 | 0.58 | 50.0 | 3.82e-01 | 97.6% | 71.4% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.57 | 39.0 | 3.11e-01 | 73.8% | 37.2% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.57 | 45.0 | 2.61e-01 | 97.6% | 86.1% |
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 42.0 | 4.27e-01 | 85.7% | 87.5% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 46.0 | 4.20e-01 | 95.2% | 87.5% |
| 4ijdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.53 | 35.0 | 3.70e-01 | 95.2% | 93.5% |
| 4ccgY00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 41.0 | 3.68e-01 | 95.2% | 61.2% |
| 2bn8A00 | 3.30.730.20 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › Cell division activator CedA | 0.51 | 39.0 | 3.55e-01 | 95.2% | 61.2% |
| 1kbaA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 36.0 | 3.15e-01 | 73.8% | 63.6% |
| 3rosA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 39.0 | 2.51e-01 | 97.6% | 72.4% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.50 | 41.0 | 3.68e-01 | 95.2% | 73.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3392574 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.92 | 76.0 | 7.49e-01 | 100.0% | 84.4% |
| 3425436 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 66.0 | 6.84e-01 | 97.6% | 100.0% |
| 5018523 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 48.0 | 4.08e-01 | 92.9% | 41.4% |
| 4031664 | 375.1.1.75 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2197 | 0.72 | 57.0 | 5.86e-01 | 88.1% | 100.0% |
| 3362641 | 376.1.3.57 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_ULT1 | 0.71 | 53.0 | 4.90e-01 | 88.1% | 81.7% |
| 3360654 | 376.1.3.57 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_ULT1 | 0.69 | 53.0 | 4.97e-01 | 90.5% | 89.1% |
| 3197786 | 376.1.3.75 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_Tbcl_Rhp7 | 0.68 | 56.0 | 5.33e-01 | 100.0% | 78.0% |
| 3741583 | 375.1.1.14 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L32p | 0.67 | 44.0 | 4.63e-01 | 100.0% | 96.7% |
| 5057901 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.67 | 43.0 | 4.12e-01 | 92.9% | 54.0% |
| 3521800 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 50.0 | 5.35e-01 | 83.3% | 100.0% |
| 4979944 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 52.0 | 5.36e-01 | 95.2% | 100.0% |
| 5027043 | 375.1.1.12 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_S27e | 0.63 | 44.0 | 4.36e-01 | 73.8% | 100.0% |
| 3412818 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.59 | 44.0 | 4.65e-01 | 95.2% | 100.0% |
| 3738951 | 11.1.1.642 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 | 0.58 | 40.0 | 3.05e-01 | 73.8% | 43.6% |
| 3411497 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.58 | 38.0 | 4.10e-01 | 92.9% | 93.3% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 39.0 | 3.92e-01 | 90.5% | 73.3% |
| 3241715 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.54 | 40.0 | 2.83e-01 | 97.6% | 25.2% |
| 3475783 | 822.2.1.1 ↗ | a+b two layers › GYF/BRK domain-like › BRK domain-like › BRK domain-like › BRK | 0.53 | 35.0 | 3.68e-01 | 71.4% | 97.1% |
| 3707814 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.52 | 39.0 | 4.20e-01 | 83.3% | 100.0% |
| 3970701 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.52 | 34.0 | 3.50e-01 | 71.4% | 67.5% |
| 5055673 | 7056.1.1.0 ↗ | few secondary structure elements › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan › Zinc binding domain of metalloprotease Spartan | 0.52 | 37.0 | 3.80e-01 | 95.2% | 82.5% |
| 5056127 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.52 | 42.0 | 2.42e-01 | 95.2% | 53.1% |
| 4977355 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.51 | 34.0 | 2.35e-01 | 71.4% | 16.8% |
| 3304057 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.51 | 41.0 | 2.58e-01 | 97.6% | 57.3% |
| 4023366 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.50 | 39.0 | 3.23e-01 | 95.2% | 75.6% |