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IMGVR_UViG_3300021590_000059-3300021590-Ga0190354_100008010
Arc-VirIMGVR_UViG_3300021590_000059-3300021590-Ga0190354_100008010
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-202_263-284
Domain cluster:
rep: IMGVR_UViG_3300021469_000149-3300021469-Ga0190361_10033865__D4-222
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01370.28 best | Epimerase | 62.6 | 5.20e-17 | 83.7% | 63.3% |
| PF16363.12 | GDP_Man_Dehyd | 57.3 | 2.60e-15 | 72.9% | 40.1% |
D2
high
residues 217-256_288-326_346-369
Domain cluster:
rep: NAD-dependent_epimerase_dehydratase__YP_007354433__Acanthamoeba_polyphaga_moumouvirus__1269028__D181-219_250-286_303-320
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1i24A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.94 | 91.0 | 7.95e-01 | 100.0% | 86.6% |
| 6dntA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.79 | 68.0 | 6.76e-01 | 91.3% | 99.1% |
| 4lw8A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.79 | 62.0 | 6.82e-01 | 87.4% | 100.0% |
| 6wjaA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.78 | 64.0 | 6.47e-01 | 87.4% | 99.0% |
| 6vloC02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.76 | 68.0 | 6.91e-01 | 95.1% | 96.0% |
| 2c5aA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.76 | 66.0 | 6.01e-01 | 94.2% | 75.0% |
| 4e5yD02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.75 | 66.0 | 6.70e-01 | 95.1% | 99.0% |
| 1z7bA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.74 | 59.0 | 6.29e-01 | 84.5% | 98.9% |
| 1db3A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.74 | 62.0 | 6.01e-01 | 90.3% | 98.3% |
| 1ek6A01 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.73 | 64.0 | 5.98e-01 | 96.1% | 93.7% |
| 1n7hB01 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.72 | 61.0 | 6.17e-01 | 90.3% | 92.1% |
| 6kv9A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.72 | 61.0 | 6.15e-01 | 91.3% | 99.0% |
| 6gpkA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.71 | 61.0 | 6.04e-01 | 92.2% | 100.0% |
| 3i6iA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.65 | 52.0 | 5.00e-01 | 84.5% | 95.7% |
| 3eheA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.62 | 54.0 | 5.56e-01 | 91.3% | 99.0% |
| 1di0A00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.60 | 42.0 | 3.76e-01 | 72.8% | 96.6% |
| 4id9B02 | 3.90.25.60 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › | 0.59 | 51.0 | 4.91e-01 | 93.2% | 97.4% |
| 4k9qA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.58 | 40.0 | 3.27e-01 | 70.9% | 45.6% |
| 4g41A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.56 | 39.0 | 3.01e-01 | 71.8% | 77.5% |
| 1q1gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.55 | 40.0 | 3.09e-01 | 75.7% | 84.8% |
| 3bwwA01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 37.0 | 2.82e-01 | 70.9% | 32.0% |
| 3ug7C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 3.08e-01 | 89.3% | 99.0% |
| 1tzbA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 43.0 | 3.93e-01 | 90.3% | 84.2% |
| 7wmzC01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 36.0 | 2.65e-01 | 70.9% | 46.3% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997232 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.93 | 90.0 | 5.67e-01 | 100.0% | 37.1% |
| 3280602 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.82 | 75.0 | 5.21e-01 | 98.1% | 96.5% |
| 3284718 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.80 | 72.0 | 4.93e-01 | 96.1% | 88.1% |
| 5030643 | 2003.1.1.72 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDP_Man_Dehyd | 0.78 | 71.0 | 4.85e-01 | 96.1% | 93.8% |
| 5078873 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.77 | 66.0 | 4.56e-01 | 92.2% | 89.3% |
| 157292 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.63 | 44.0 | 3.92e-01 | 72.8% | 96.0% |
| 4387071 | 2007.1.4.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase | 0.62 | 43.0 | 4.27e-01 | 71.8% | 100.0% |
| 869081 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.61 | 42.0 | 3.49e-01 | 71.8% | 83.2% |
| 4957158 | 2007.2.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red | 0.58 | 41.0 | 3.26e-01 | 73.8% | 84.7% |
| 4956039 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.57 | 40.0 | 3.66e-01 | 73.8% | 97.1% |
| 5056808 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.57 | 42.0 | 3.22e-01 | 77.7% | 70.5% |
| 5016938 | 2007.2.2.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › LMWPc | 0.55 | 46.0 | 4.21e-01 | 90.3% | 88.1% |
| 4430285 | 7516.1.1.5 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › IspD | 0.55 | 40.0 | 3.15e-01 | 76.7% | 75.2% |
| 4954038 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.54 | 39.0 | 2.85e-01 | 76.7% | 51.0% |
| 4964384 | 2002.1.1.154 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_1 | 0.52 | 36.0 | 2.56e-01 | 71.8% | 40.9% |
| 4655849 | 2007.6.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › PGI | 0.51 | 41.0 | 3.43e-01 | 91.3% | 76.3% |
| 4999434 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.51 | 37.0 | 2.61e-01 | 76.7% | 46.1% |