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IMGVR_UViG_3300021590_000082-3300021590-Ga0190354_10013229
Arc-VirIMGVR_UViG_3300021590_000082-3300021590-Ga0190354_10013229
Identity
- Kingdom:
- archaea
Quality
94.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-65
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ev6A03 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.70 | 49.0 | 5.10e-01 | 73.8% | 91.4% |
| 2p92A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.68 | 46.0 | 4.00e-01 | 70.5% | 91.6% |
| 5pg1A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.67 | 50.0 | 4.07e-01 | 80.3% | 90.4% |
| 3ce9A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.61 | 45.0 | 3.19e-01 | 78.7% | 31.4% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.60 | 42.0 | 2.84e-01 | 75.4% | 20.2% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 42.0 | 3.86e-01 | 78.7% | 67.1% |
| 2yguC00 | 1.10.238.190 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.58 | 42.0 | 3.41e-01 | 77.0% | 48.3% |
| 2fh5A01 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 47.0 | 3.87e-01 | 95.1% | 70.5% |
| 1bf5A01 | 1.20.1050.20 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain | 0.57 | 40.0 | 2.89e-01 | 73.8% | 33.9% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 40.0 | 3.40e-01 | 77.0% | 45.2% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 37.0 | 3.20e-01 | 70.5% | 56.6% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1172764 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.67 | 50.0 | 4.91e-01 | 80.3% | 86.4% |
| 4870301 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.67 | 50.0 | 4.91e-01 | 80.3% | 86.4% |
| 4162539 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.65 | 46.0 | 3.16e-01 | 75.4% | 83.2% |
| 3254126 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.63 | 49.0 | 4.03e-01 | 86.9% | 47.0% |
| 3471229 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.63 | 53.0 | 3.43e-01 | 100.0% | 19.7% |
| 3528091 | 5058.1.1.17 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › NRN1 | 0.62 | 43.0 | 3.59e-01 | 73.8% | 42.7% |
| 4188712 | 605.1.1.194 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › NRN1 | 0.61 | 43.0 | 3.57e-01 | 73.8% | 42.7% |
| 3739454 | 192.5.1.38 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › NEDD4_Bsd2 | 0.61 | 43.0 | 3.61e-01 | 73.8% | 98.1% |
| 3943772 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.60 | 42.0 | 2.95e-01 | 73.8% | 29.5% |
| 3719904 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.59 | 49.0 | 3.10e-01 | 100.0% | 16.5% |
| 3187391 | 5076.1.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier | 0.56 | 47.0 | 3.24e-01 | 100.0% | 34.3% |
| 3702706 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.55 | 39.0 | 3.52e-01 | 73.8% | 61.3% |
| 3189639 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.54 | 39.0 | 3.87e-01 | 78.7% | 100.0% |
| 4890998 | 148.1.3.28 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_11 | 0.54 | 47.0 | 3.01e-01 | 98.4% | 57.0% |
| 4648944 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.54 | 43.0 | 3.08e-01 | 95.1% | 84.7% |
| 3229806 | 6157.1.1.1 ↗ | alpha bundles › GKAP homology domain 1 › GKAP homology domain 1 › GKAP homology domain 1 › GKAP | 0.53 | 38.0 | 3.13e-01 | 77.0% | 86.1% |
| 3507297 | 109.4.1.839 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT | 0.51 | 42.0 | 2.79e-01 | 100.0% | 46.5% |
| 3625044 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.50 | 37.0 | 3.14e-01 | 80.3% | 54.3% |