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IMGVR_UViG_3300021962_011364-3300021962-Ga0222713_100285161

Arc-Vir

IMGVR_UViG_3300021962_011364-3300021962-Ga0222713_100285161

Quality

66.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 135-273
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.74 69.0 6.01e-01 100.0% 95.6%
4rlcA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.73 63.0 6.45e-01 100.0% 94.8%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.69 65.0 6.26e-01 100.0% 96.1%
2lhfA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 63.0 5.71e-01 100.0% 98.3%
2obdA02 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.66 55.0 4.90e-01 87.8% 89.9%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 35.0 4.57e-01 81.3% 96.1%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.64 28.0 4.30e-01 87.8% 98.3%
3v8uA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.63 37.0 4.42e-01 100.0% 87.8%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.63 58.0 5.71e-01 99.3% 100.0%
3w9kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.62 39.0 3.96e-01 97.8% 63.7%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 50.0 4.94e-01 94.2% 81.6%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 57.0 4.59e-01 100.0% 98.0%
1idpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 47.0 4.64e-01 81.3% 96.6%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.60 53.0 4.21e-01 96.4% 84.2%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.59 47.0 4.82e-01 93.5% 87.8%
2obdA01 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.59 49.0 3.84e-01 88.5% 70.0%
4gb5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 45.0 4.46e-01 81.3% 92.6%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.58 53.0 4.13e-01 100.0% 99.7%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 44.0 4.58e-01 81.3% 95.5%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 44.0 4.19e-01 81.3% 79.3%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 4.25e-01 84.2% 98.8%
4afkA00 2.40.160.100 Mainly Beta › Beta Barrel › Porin › 0.56 50.0 3.55e-01 97.8% 46.5%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 50.0 3.81e-01 97.8% 97.1%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 4.36e-01 84.2% 98.0%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.54 42.0 4.28e-01 81.3% 94.2%
2cw9A00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 42.0 3.83e-01 81.3% 76.9%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.54 47.0 3.49e-01 93.5% 70.1%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.54 40.0 3.19e-01 77.7% 52.4%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.54 47.0 3.25e-01 92.1% 34.6%
3eyrA00 3.15.10.40 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Uncharacterised protein PF07273 family, DUF1439 0.54 44.0 4.15e-01 87.8% 80.5%
3e8tA00 3.15.10.30 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › TULIP domain 0.53 49.0 4.19e-01 100.0% 97.2%
1lshA04 2.20.80.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex, chain A, domain 4 › Lipovitellin-phosvitin complex, chain A, domain 4 0.53 42.0 3.47e-01 84.9% 57.0%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.52 45.0 4.20e-01 94.2% 84.5%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 48.0 3.19e-01 99.3% 99.4%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.52 46.0 3.05e-01 100.0% 96.7%
3j7yd00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 39.0 3.78e-01 80.6% 82.7%
3fhhA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 45.0 3.03e-01 93.5% 36.2%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 45.0 3.14e-01 93.5% 34.8%
1af6A00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.51 44.0 3.18e-01 95.7% 34.9%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.51 44.0 3.44e-01 94.2% 97.4%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 4.05e-01 81.3% 88.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3164538 5084.1.1.2 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.76 72.0 6.31e-01 100.0% 92.8%
3837948 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.75 70.0 6.22e-01 99.3% 92.1%
4113088 5084.1.1.2 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.73 69.0 5.97e-01 100.0% 94.1%
3838622 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.73 68.0 5.85e-01 100.0% 96.2%
3838829 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.70 66.0 5.94e-01 100.0% 96.2%
3391818 3070.2.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.70 41.0 4.83e-01 87.1% 81.8%
4099548 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.70 65.0 6.34e-01 100.0% 98.7%
3839690 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.69 65.0 5.71e-01 99.3% 98.5%
3840054 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 61.0 6.18e-01 95.7% 99.3%
4417262 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.68 64.0 5.97e-01 100.0% 97.6%
3838164 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 64.0 5.74e-01 100.0% 97.3%
4224449 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.67 63.0 5.83e-01 100.0% 95.4%
5027751 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.67 62.0 6.06e-01 100.0% 98.7%
4285298 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.66 61.0 5.46e-01 100.0% 95.8%
191268 5084.1.1.9 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagL 0.63 58.0 5.71e-01 99.3% 100.0%
3545097 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.63 52.0 4.66e-01 87.8% 84.2%
3979621 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 58.0 4.39e-01 100.0% 86.2%
4521584 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 57.0 4.29e-01 100.0% 85.6%
4234836 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.61 57.0 4.33e-01 100.0% 84.9%
4009884 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.60 56.0 4.29e-01 100.0% 86.1%
885 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.60 53.0 4.21e-01 96.4% 84.2%
4669372 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 53.0 4.09e-01 97.1% 91.6%
3838109 5084.9.1.1 beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR 0.59 54.0 4.57e-01 100.0% 94.3%
3264681 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.59 46.0 3.98e-01 82.7% 72.6%
3164364 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 55.0 4.28e-01 100.0% 84.8%
4668983 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.59 50.0 4.83e-01 94.2% 80.0%
3971932 5084.3.1.0 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter 0.59 51.0 3.35e-01 95.0% 49.8%
3789884 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.58 47.0 3.99e-01 87.1% 71.9%
3697337 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.58 41.0 4.00e-01 72.7% 76.8%
3395952 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.58 48.0 4.31e-01 87.8% 95.8%
3875809 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.58 47.0 4.42e-01 94.2% 71.5%
3622176 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.58 48.0 3.36e-01 88.5% 44.4%
4582939 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.58 53.0 4.02e-01 99.3% 93.8%
200993 5084.9.1.1 beta barrels › Outer membrane meander beta-barrels › Lipid A deacylase LpxR › Lipid A deacylase LpxR › LpxR 0.58 53.0 4.13e-01 100.0% 99.7%
4244652 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.57 51.0 3.66e-01 97.1% 54.1%
4304754 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 50.0 3.92e-01 96.4% 65.2%
3969681 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.57 50.0 3.93e-01 95.7% 53.2%
3534691 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.57 46.0 4.34e-01 94.2% 71.5%
3967717 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.56 52.0 3.94e-01 98.6% 97.7%
4622073 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.56 49.0 3.76e-01 95.7% 98.8%
3541529 883.1.1.15 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C 0.56 52.0 3.61e-01 100.0% 45.6%
4025861 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.56 48.0 4.52e-01 94.2% 77.6%
1312446 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.55 50.0 3.81e-01 97.8% 97.1%
3966457 5084.5.2.0 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like 0.55 50.0 3.48e-01 100.0% 63.4%
4662377 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.55 51.0 3.93e-01 99.3% 94.6%
3064472 5084.5.2.2 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › Alginate_exp 0.55 50.0 3.43e-01 98.6% 43.1%
4823574 4030.1.1.1 alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › F_actin_cap_B 0.55 47.0 4.59e-01 94.2% 83.3%
3964119 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.54 48.0 3.43e-01 94.2% 60.3%
2755875 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.53 46.0 3.09e-01 92.8% 41.9%
4591679 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.53 46.0 3.42e-01 94.2% 96.4%
4184524 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.53 46.0 3.52e-01 96.4% 97.1%
3735831 9.1.1.37 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF6314 0.53 44.0 3.93e-01 100.0% 63.0%
3981236 5084.5.4.6 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › TraF_2 0.52 48.0 3.75e-01 100.0% 93.1%
3978947 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.52 46.0 3.42e-01 100.0% 100.0%
4371295 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.52 45.0 3.00e-01 92.8% 31.2%
4332907 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.52 42.0 3.12e-01 87.8% 39.5%
4371754 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.51 45.0 2.93e-01 93.5% 25.0%
3227628 5087.3.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht 0.51 41.0 3.14e-01 86.3% 43.9%
3839269 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.51 47.0 2.99e-01 99.3% 98.8%
3979654 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.51 47.0 3.06e-01 100.0% 97.1%
3947597 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.50 43.0 3.36e-01 92.8% 44.7%
3946102 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.50 36.0 2.59e-01 92.8% 24.8%