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IMGVR_UViG_3300021963_008717-3300021963-Ga0222712_100086032

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300021963_008717-3300021963-Ga0222712_100086032 ↗
Kingdom:: archaea

Quality

90.0 mean pLDDT

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-273

PDB

Domain cluster: rep: LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00088__D24-175_238-280

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2x1cB01	3.60.60.10	Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A	0.79	73.0	7.06e-01	97.3%	87.6%
3gvzA00	3.60.60.10	Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A	0.77	73.0	7.42e-01	100.0%	99.6%
2pvaA00	3.60.60.10	Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A	0.70	67.0	6.13e-01	100.0%	96.7%
2hezA00	3.60.60.10	Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A	0.68	65.0	6.01e-01	100.0%	100.0%
3d2fA03	3.30.420.40	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain	0.55	20.0	3.35e-01	92.7%	90.3%
1e3mB02	3.30.420.110	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain	0.52	24.0	3.25e-01	99.2%	80.9%
4agiA00	2.120.10.70	Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin	0.52	44.0	4.13e-01	90.0%	96.8%

ECOD (17)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5063512	210.1.2.0 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain	0.79	75.0	6.35e-01	98.1%	73.3%
5052543	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.78	75.0	6.40e-01	99.2%	68.9%
3974337	210.1.2.5 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69	0.78	75.0	6.25e-01	100.0%	94.1%
134473	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.77	73.0	7.42e-01	100.0%	99.6%
5038962	375.1.1.0 ↗	few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related	0.77	10.0	3.00e-01	86.9%	64.4%
4380054	210.1.2.5 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69	0.77	74.0	5.91e-01	100.0%	92.8%
4964269	210.1.2.8 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › TANGO2	0.77	71.0	7.30e-01	96.9%	99.2%
5064525	210.1.2.5 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69	0.77	74.0	6.11e-01	100.0%	97.2%
3979646	210.1.2.5 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69	0.77	73.0	5.90e-01	100.0%	95.3%
5047706	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.76	74.0	7.29e-01	100.0%	98.9%
4074976	210.1.2.5 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › Peptidase_C69	0.76	73.0	5.86e-01	100.0%	93.9%
3205783	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.76	72.0	6.25e-01	98.8%	69.2%
3394746	210.1.2.4 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › AAT	0.74	70.0	6.07e-01	98.5%	70.1%
3285001	210.1.2.0 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain	0.70	66.0	6.00e-01	99.2%	99.7%
3076054	210.1.2.2 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › CBAH	0.67	64.0	5.94e-01	100.0%	99.1%
5023758	210.1.2.0 ↗	a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain	0.65	58.0	5.94e-01	99.6%	97.2%
5071337	2484.1.1.49 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N	0.52	21.0	3.12e-01	90.8%	85.7%