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IMGVR_UViG_3300021963_008717-3300021963-Ga0222712_100086034
Arc-VirIMGVR_UViG_3300021963_008717-3300021963-Ga0222712_100086034
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-154
Domain cluster:
rep: gwf2_scaffold_96_prodigal-single.1__X__X__00453__D4-126
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01467.33 best | CTP_transf_like | 27.0 | 6.60e-06 | 94.8% | 65.4% |
D2
high
residues 315-372
Domain cluster:
rep: BML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00309__D63-118
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18905.6 best | DUF5661 | 58.7 | 8.10e-16 | 98.3% | 93.8% |
D3
high
residues 422-566
Domain cluster:
rep: IMGVR_UViG_3300013099_000017-3300013099-Ga0164315_10000001230__D94-207
D4
medium
residues 382-421_574-696
Domain cluster:
rep: IMGVR_UViG_3300010353_002388-3300010353-Ga0116236_100021778__D27-56_210-335
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.61 | 33.0 | 3.75e-01 | 90.8% | 66.9% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 32.0 | 3.71e-01 | 90.8% | 70.0% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.59 | 33.0 | 3.88e-01 | 91.4% | 78.4% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 40.0 | 4.45e-01 | 91.4% | 91.1% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.58 | 30.0 | 3.61e-01 | 90.8% | 74.5% |
| 3dd7C00 | 1.20.120.1870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain | 0.58 | 28.0 | 3.18e-01 | 85.9% | 58.2% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 31.0 | 3.95e-01 | 89.6% | 89.5% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.57 | 26.0 | 3.31e-01 | 87.7% | 70.8% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 37.0 | 3.55e-01 | 74.2% | 56.3% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.55 | 30.0 | 3.99e-01 | 82.2% | 100.0% |
| 3op0A01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.55 | 36.0 | 3.86e-01 | 91.4% | 77.2% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 38.0 | 4.11e-01 | 93.9% | 85.8% |
| 1h6gA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.53 | 37.0 | 4.11e-01 | 92.6% | 91.9% |
| 4al0A00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.52 | 32.0 | 3.43e-01 | 85.3% | 67.8% |
| 3fcnA00 | 1.20.1220.20 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Uncharcterised protein PF01724 | 0.52 | 31.0 | 3.14e-01 | 82.2% | 57.6% |
| 2oexA01 | 1.20.120.560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain | 0.51 | 37.0 | 3.93e-01 | 90.8% | 83.9% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 23.0 | 2.70e-01 | 77.3% | 57.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3903423 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.60 | 33.0 | 4.00e-01 | 90.2% | 81.9% |
| 3867152 | 601.1.2.87 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › TMEM126 | 0.59 | 37.0 | 3.82e-01 | 89.6% | 66.0% |
| 3741788 | 633.21.1.10 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › MARVEL | 0.58 | 33.0 | 3.41e-01 | 89.6% | 56.1% |
| 3217241 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.58 | 31.0 | 3.14e-01 | 74.2% | 49.1% |
| 3436578 | 3755.4.1.17 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Rx_N | 0.57 | 40.0 | 4.13e-01 | 90.8% | 76.7% |
| 3407735 | 3289.1.1.8 ↗ | alpha complex topology › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Nck-associated protein 1/Cytoplasmic FMR1-interacting protein 1 › Strumpellin | 0.56 | 30.0 | 3.61e-01 | 90.2% | 77.1% |
| 3677651 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.55 | 39.0 | 3.98e-01 | 93.9% | 74.8% |
| 3285567 | 5069.1.1.17 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF6529 | 0.54 | 34.0 | 3.35e-01 | 94.5% | 57.5% |
| 3881307 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.53 | 38.0 | 4.12e-01 | 94.5% | 87.1% |
| 3451722 | 3930.1.1.0 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase | 0.52 | 30.0 | 3.45e-01 | 85.9% | 74.4% |
| 5042406 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.52 | 26.0 | 3.33e-01 | 71.8% | 81.1% |
| 3647455 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.52 | 34.0 | 3.43e-01 | 98.2% | 64.8% |
| 3444933 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.52 | 39.0 | 4.13e-01 | 91.4% | 89.7% |
| 3221588 | 188.1.1.0 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain | 0.51 | 41.0 | 3.65e-01 | 85.3% | 81.2% |
| 3291430 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.51 | 35.0 | 3.72e-01 | 89.6% | 79.3% |
| 3733141 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.51 | 37.0 | 3.96e-01 | 90.2% | 84.8% |
| 3419202 | 611.9.1.0 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain | 0.51 | 35.0 | 3.86e-01 | 91.4% | 86.9% |
| 5037413 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 37.0 | 3.73e-01 | 94.5% | 75.2% |
| 3413779 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.50 | 34.0 | 3.46e-01 | 96.9% | 69.7% |
D5
medium
residues 697-780