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IMGVR_UViG_3300022225_000017-3300022225-Ga0187833_1000271424
Arc-VirIMGVR_UViG_3300022225_000017-3300022225-Ga0187833_1000271424
Identity
- Kingdom:
- archaea
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-64
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l31A00 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.71 | 64.0 | 5.12e-01 | 100.0% | 77.7% |
| 4hi8B00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.71 | 56.0 | 5.20e-01 | 100.0% | 68.1% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 50.0 | 4.91e-01 | 100.0% | 75.0% |
| 4v3lC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 50.0 | 4.77e-01 | 100.0% | 72.5% |
| 2rowA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 50.0 | 4.70e-01 | 98.3% | 70.4% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.61 | 54.0 | 4.58e-01 | 100.0% | 66.7% |
| 1mv3A01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 50.0 | 4.73e-01 | 100.0% | 74.3% |
| 3uw8A02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.61 | 45.0 | 3.50e-01 | 100.0% | 35.1% |
| 2l0bA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 45.0 | 3.97e-01 | 100.0% | 56.0% |
| 1vj0B01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.56 | 48.0 | 3.32e-01 | 100.0% | 51.2% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 45.0 | 4.35e-01 | 87.9% | 81.8% |
| 2xzm500 | 3.30.1740.20 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Ribosomal protein S26 | 0.55 | 47.0 | 4.00e-01 | 96.6% | 76.5% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 42.0 | 4.04e-01 | 93.1% | 77.3% |
| 3ip1A01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.53 | 44.0 | 3.04e-01 | 100.0% | 44.0% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 3.88e-01 | 91.4% | 77.6% |
| 3goxA03 | 3.40.1800.10 | Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases | 0.50 | 43.0 | 3.93e-01 | 100.0% | 75.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3485409 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.85 | 52.0 | 6.07e-01 | 89.7% | 90.0% |
| 3336718 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.74 | 61.0 | 5.31e-01 | 100.0% | 61.2% |
| 4934241 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.73 | 64.0 | 5.73e-01 | 100.0% | 71.2% |
| 4936660 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.72 | 60.0 | 6.18e-01 | 100.0% | 94.5% |
| 3250863 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.71 | 58.0 | 5.10e-01 | 100.0% | 61.2% |
| 3445801 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.70 | 52.0 | 5.21e-01 | 98.3% | 76.7% |
| 3332568 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.70 | 53.0 | 4.63e-01 | 100.0% | 53.3% |
| 3395156 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.69 | 62.0 | 4.92e-01 | 100.0% | 53.9% |
| 3828759 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 44.0 | 4.78e-01 | 94.8% | 84.4% |
| 3803132 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 48.0 | 5.26e-01 | 96.6% | 97.8% |
| 3257948 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.67 | 51.0 | 4.88e-01 | 100.0% | 70.6% |
| 3677216 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.66 | 52.0 | 5.19e-01 | 100.0% | 83.3% |
| 3813195 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.66 | 47.0 | 4.85e-01 | 98.3% | 80.0% |
| 3315604 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 51.0 | 4.96e-01 | 100.0% | 76.9% |
| 3380774 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 52.0 | 5.10e-01 | 100.0% | 81.0% |
| 4228326 | 101.1.9.75 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF61 | 0.64 | 49.0 | 4.66e-01 | 100.0% | 69.6% |
| 3647807 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 52.0 | 4.24e-01 | 100.0% | 49.5% |
| 5052356 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.63 | 53.0 | 5.17e-01 | 98.3% | 83.1% |
| 3716127 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.63 | 57.0 | 4.70e-01 | 100.0% | 65.0% |
| 4141899 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.63 | 45.0 | 4.37e-01 | 100.0% | 67.7% |
| 3832280 | 377.1.1.86 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1_2 | 0.63 | 49.0 | 4.67e-01 | 100.0% | 71.4% |
| 3471529 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 46.0 | 5.09e-01 | 77.6% | 100.0% |
| 3365516 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 50.0 | 4.44e-01 | 100.0% | 61.2% |
| 3309813 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.60 | 47.0 | 4.66e-01 | 100.0% | 83.3% |
| 3822097 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.59 | 52.0 | 3.82e-01 | 100.0% | 43.1% |
| 3745904 | 377.1.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S26e | 0.59 | 49.0 | 4.48e-01 | 94.8% | 69.3% |
| 3721368 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 48.0 | 3.67e-01 | 89.7% | 43.1% |
| 3811931 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.58 | 48.0 | 4.69e-01 | 94.8% | 82.8% |
| 4029764 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.58 | 50.0 | 4.47e-01 | 100.0% | 75.3% |
| 5021347 | 376.1.2.45 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › DUF2180 | 0.57 | 46.0 | 4.43e-01 | 87.9% | 78.5% |
| 3311421 | 4271.1.1.3 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like › DNA_primase_lrg_N | 0.56 | 49.0 | 3.30e-01 | 100.0% | 30.0% |
| 3250324 | 2.1.1.69 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 | 0.55 | 43.0 | 3.41e-01 | 89.7% | 56.3% |
| 4357850 | 2.1.1.83 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SfsA_N | 0.54 | 43.0 | 3.91e-01 | 89.7% | 100.0% |
| 3645795 | 377.7.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › 82 prophage-derived uncharacterized protein ybcO › 82 prophage-derived uncharacterized protein ybcO | 0.53 | 46.0 | 4.11e-01 | 100.0% | 82.4% |
| 3570452 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.52 | 46.0 | 2.80e-01 | 98.3% | 31.8% |
| 3235864 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 43.0 | 3.97e-01 | 94.8% | 97.3% |