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IMGVR_UViG_3300022225_000017-3300022225-Ga0187833_1000271429
Arc-VirIMGVR_UViG_3300022225_000017-3300022225-Ga0187833_1000271429
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 25-75
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ri5A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.71 | 61.0 | 3.82e-01 | 100.0% | 19.0% |
| 2dgdA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 41.0 | 3.50e-01 | 92.2% | 37.0% |
| 3v4dB00 | 3.30.1330.40 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like | 0.63 | 45.0 | 3.47e-01 | 94.1% | 32.0% |
| 1un2A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 50.0 | 3.46e-01 | 100.0% | 41.9% |
| 3qocA00 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.58 | 41.0 | 3.13e-01 | 94.1% | 30.2% |
| 1xm7A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 46.0 | 3.33e-01 | 100.0% | 43.5% |
| 7exbA01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.57 | 46.0 | 3.01e-01 | 100.0% | 24.4% |
| 1qhhD01 | 3.30.160.800 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 47.0 | 4.22e-01 | 98.0% | 82.9% |
| 5flmE01 | 3.40.1340.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain | 0.56 | 40.0 | 3.09e-01 | 98.0% | 30.1% |
| 4iilA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 46.0 | 3.26e-01 | 96.1% | 32.8% |
| 1ufoA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 47.0 | 3.12e-01 | 100.0% | 76.4% |
| 3o90B00 | 3.40.50.850 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Isochorismatase-like | 0.56 | 45.0 | 3.22e-01 | 98.0% | 39.7% |
| 1tvzA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 42.0 | 2.89e-01 | 94.1% | 35.8% |
| 3kc2A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 42.0 | 3.01e-01 | 96.1% | 26.8% |
| 2xi5A00 | 3.40.91.60 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.55 | 42.0 | 3.04e-01 | 94.1% | 95.1% |
| 2j6vA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.54 | 44.0 | 2.85e-01 | 98.0% | 21.4% |
| 4rpoA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 38.0 | 3.08e-01 | 96.1% | 34.7% |
| 1cozA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 41.0 | 3.26e-01 | 92.2% | 38.1% |
| 7drdG01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.53 | 42.0 | 2.79e-01 | 98.0% | 19.2% |
| 3gwaA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 38.0 | 2.72e-01 | 94.1% | 23.3% |
| 4nv0A01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.53 | 41.0 | 2.81e-01 | 100.0% | 21.7% |
| 2ftyA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.53 | 41.0 | 2.54e-01 | 96.1% | 14.7% |
| 2ox6D00 | 1.10.3100.10 | Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein | 0.53 | 40.0 | 3.03e-01 | 94.1% | 40.4% |
| 3e1hA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 40.0 | 2.77e-01 | 94.1% | 46.0% |
| 5cmlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 2.77e-01 | 100.0% | 52.5% |
| 3delB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 39.0 | 2.97e-01 | 90.2% | 33.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3365967 | 301.7.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like | 0.64 | 44.0 | 3.57e-01 | 94.1% | 34.5% |
| 5023585 | 2007.1.1.15 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DUF2124 | 0.62 | 46.0 | 3.41e-01 | 98.0% | 28.7% |
| 5050772 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.60 | 44.0 | 3.27e-01 | 94.1% | 28.0% |
| 4980765 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.59 | 49.0 | 3.11e-01 | 100.0% | 66.1% |
| 4994719 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.58 | 46.0 | 3.18e-01 | 100.0% | 28.1% |
| 4941359 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.57 | 46.0 | 3.09e-01 | 100.0% | 28.7% |
| 3605197 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.57 | 47.0 | 3.26e-01 | 100.0% | 32.0% |
| 3720265 | 2007.2.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N | 0.57 | 45.0 | 2.87e-01 | 98.0% | 84.0% |
| 4825029 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.55 | 46.0 | 3.30e-01 | 100.0% | 30.5% |
| 5054402 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.55 | 43.0 | 2.94e-01 | 96.1% | 23.9% |
| 5014663 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.55 | 43.0 | 2.72e-01 | 94.1% | 17.3% |
| 3504726 | 2484.1.1.268 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF5641 | 0.55 | 44.0 | 2.93e-01 | 100.0% | 69.0% |
| 4985278 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.55 | 42.0 | 2.71e-01 | 94.1% | 19.0% |
| 5015329 | 7523.1.1.4 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_3 | 0.54 | 42.0 | 3.10e-01 | 90.2% | 30.7% |
| None | — | 0.53 | 41.0 | 2.63e-01 | 94.1% | 18.4% | |
| 1253198 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.53 | 44.0 | 3.48e-01 | 100.0% | 86.8% |
| 3493430 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.53 | 43.0 | 3.74e-01 | 100.0% | 56.7% |
| 1253179 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.53 | 43.0 | 3.44e-01 | 100.0% | 86.0% |
| 5009342 | 298.1.1.3 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Inos-1-P_synth | 0.52 | 41.0 | 3.41e-01 | 94.1% | 53.3% |
| 5055301 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 39.0 | 2.73e-01 | 94.1% | 23.0% |
| 3270960 | 2484.1.1.212 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RT_RNaseH | 0.52 | 41.0 | 3.26e-01 | 94.1% | 60.8% |
| 4953127 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.52 | 42.0 | 3.14e-01 | 96.1% | 36.0% |
| 5001232 | 7565.1.1.1 ↗ | a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like › Resolvase | 0.51 | 38.0 | 3.02e-01 | 90.2% | 35.5% |
| 4944349 | 2003.4.1.7 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PadR | 0.51 | 38.0 | 2.87e-01 | 96.1% | 27.8% |
| 5052560 | 7579.1.1.57 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_11 | 0.51 | 39.0 | 2.71e-01 | 96.1% | 22.9% |
| 4976034 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.50 | 39.0 | 3.73e-01 | 98.0% | 73.8% |
| 1504752 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.50 | 42.0 | 3.25e-01 | 98.0% | 78.3% |