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IMGVR_UViG_3300022227_000183-3300022227-Ga0187827_1000887110

Arc-Vir

IMGVR_UViG_3300022227_000183-3300022227-Ga0187827_1000887110

Quality

76.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-71
PDB
D2 high residues 74-174
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b34A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.75 51.0 4.12e-01 100.0% 38.9%
2xq0A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.70 51.0 4.13e-01 100.0% 42.5%
2x9zA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 55.0 4.83e-01 100.0% 59.7%
5e7gA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 44.0 4.83e-01 95.0% 85.5%
4p0dA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 54.0 4.52e-01 100.0% 56.5%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 56.0 4.85e-01 100.0% 69.2%
4ba0A04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 48.0 4.25e-01 95.0% 57.7%
3b43A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 4.63e-01 98.0% 81.4%
1cs6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 46.0 4.67e-01 99.0% 83.7%
1g1cA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 4.58e-01 98.0% 81.6%
3v10A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 49.0 4.37e-01 100.0% 62.3%
4uypA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 47.0 4.22e-01 100.0% 62.1%
4nzjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 39.0 4.07e-01 100.0% 75.8%
5uv6A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 4.47e-01 98.0% 87.6%
4wqmA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 48.0 4.87e-01 97.0% 92.9%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 52.0 4.44e-01 100.0% 71.4%
3r4dA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 4.21e-01 98.0% 83.7%
5tr9A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 47.0 4.85e-01 96.0% 97.9%
7cymA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.56 43.0 4.38e-01 95.0% 85.6%
4ofqA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 50.0 4.34e-01 100.0% 67.1%
5e4sA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 4.19e-01 93.1% 83.0%
2v5tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 4.19e-01 97.0% 83.0%
4aw7A03 2.60.120.1200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 46.0 4.33e-01 100.0% 75.4%
5lxvA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 47.0 4.04e-01 100.0% 58.3%
4fqpA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 4.07e-01 100.0% 82.6%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.31e-01 97.0% 81.2%
7ekdA01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.54 41.0 2.93e-01 83.2% 69.6%
3rnsA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 39.0 3.92e-01 98.0% 76.0%
1hkfA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.31e-01 95.0% 85.2%
3bvxA05 2.60.40.1360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.82e-01 100.0% 77.1%
3zn6A01 2.60.120.1170 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.27e-01 100.0% 96.3%
7ehgC01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 45.0 4.17e-01 95.0% 100.0%
2wnvD00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 4.21e-01 100.0% 99.2%
3mjgX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 4.08e-01 99.0% 84.2%
1jzdC00 2.60.40.1250 Mainly Beta › Sandwich › Immunoglobulin-like › Thiol:disulfide interchange protein DsbD, N-terminal domain 0.52 45.0 4.29e-01 100.0% 80.5%
4qc8A00 2.170.30.10 Mainly Beta › Beta Complex › Empty Capsid Viral Protein 2 › Parvovirus coat protein VP1/VP2 0.52 46.0 2.98e-01 100.0% 84.3%
4f3jA00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.51 45.0 4.07e-01 99.0% 94.4%
3gf6A00 2.60.120.750 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF3845 0.51 46.0 3.59e-01 100.0% 65.3%
3s7vC00 2.60.175.10 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Capsid protein VP1,Polyomavirus 0.51 46.0 3.40e-01 100.0% 96.6%
3mcaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 39.0 3.79e-01 96.0% 72.9%
3ideA02 2.60.120.660 Mainly Beta › Sandwich › Jelly Rolls › icosahedral virus 0.51 45.0 4.03e-01 100.0% 95.1%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 39.0 3.70e-01 100.0% 68.9%
5mc9A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 43.0 3.65e-01 100.0% 95.6%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944779 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.70 55.0 4.36e-01 100.0% 42.6%
5033579 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 56.0 5.28e-01 98.0% 75.0%
3892135 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 53.0 5.23e-01 98.0% 80.9%
3899153 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.64 50.0 5.19e-01 97.0% 89.5%
4030574 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.64 45.0 4.88e-01 100.0% 88.1%
3474520 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 46.0 4.57e-01 84.2% 72.4%
3399519 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.63 46.0 4.28e-01 94.1% 60.0%
4969147 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 50.0 5.08e-01 97.0% 87.0%
1554319 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.62 56.0 4.84e-01 100.0% 68.8%
5050654 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.61 54.0 4.61e-01 100.0% 60.0%
1498248 4178.1.1.1 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.61 48.0 4.25e-01 95.0% 57.7%
4082138 4287.1.1.1 beta sandwiches › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › ZapD 0.61 42.0 4.52e-01 95.0% 85.9%
3186198 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.60 47.0 4.36e-01 100.0% 66.4%
4969148 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.75e-01 93.1% 86.3%
5028827 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 4.84e-01 100.0% 84.8%
4030741 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 52.0 4.41e-01 100.0% 57.6%
3972567 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.59 46.0 4.86e-01 100.0% 93.3%
4944189 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 51.0 4.01e-01 100.0% 44.7%
4268363 11.1.1.142 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DsbD_N 0.58 49.0 4.73e-01 99.0% 80.9%
4958674 1.1.7.7 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.58 49.0 4.99e-01 98.0% 95.0%
5081164 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.78e-01 99.0% 84.5%
3991227 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 4.40e-01 99.0% 74.8%
3937467 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.58 45.0 4.32e-01 98.0% 73.0%
4965938 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 50.0 4.95e-01 98.0% 92.7%
3461080 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.57 41.0 3.68e-01 100.0% 53.6%
4000993 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.57 45.0 4.21e-01 98.0% 68.8%
3786655 12.1.1.44 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_5_C 0.57 47.0 4.50e-01 100.0% 76.7%
3397453 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.57 44.0 4.43e-01 97.0% 80.0%
3425735 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.56 43.0 3.76e-01 99.0% 54.0%
5032885 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 40.0 4.28e-01 97.0% 88.2%
3415183 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 42.0 3.42e-01 79.2% 86.4%
3572284 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.56 44.0 4.47e-01 99.0% 87.0%
4984155 11.1.1.1430 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › HMG-CoA_red_N 0.56 49.0 4.83e-01 97.0% 89.1%
4107101 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.56 48.0 4.92e-01 100.0% 100.0%
3479688 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 49.0 4.31e-01 98.0% 75.3%
3271205 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 44.0 4.46e-01 97.0% 87.0%
4946901 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 45.0 4.52e-01 99.0% 88.6%
3572285 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.55 44.0 4.35e-01 99.0% 83.8%
5041444 10.1.2.184 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PepX_C 0.55 49.0 4.12e-01 100.0% 97.7%
5039171 11.1.5.154 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › HMG-CoA_red_N 0.55 49.0 4.75e-01 100.0% 90.4%
3683343 10.32.1.38 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like 0.54 47.0 3.76e-01 100.0% 86.8%
4954605 10.1.2.186 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 0.54 46.0 4.34e-01 100.0% 76.0%
5038624 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.59e-01 96.0% 92.7%
3269322 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 48.0 4.07e-01 99.0% 87.0%
4064076 4182.1.1.0 beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.53 41.0 4.37e-01 99.0% 100.0%
3532721 11.1.5.95 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › TMEM132_3rd 0.53 42.0 3.71e-01 100.0% 58.0%
4116672 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 42.0 3.89e-01 100.0% 65.9%
3741536 10.32.1.173 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Muskelin_N 0.53 47.0 4.03e-01 100.0% 97.0%
3973898 1.1.7.89 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.53 46.0 4.15e-01 100.0% 78.6%
3578512 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 41.0 4.13e-01 98.0% 86.0%
3601703 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 46.0 3.90e-01 100.0% 94.3%
4167365 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 43.0 4.48e-01 100.0% 96.8%
3565984 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 3.29e-01 99.0% 39.1%
3942243 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 46.0 4.15e-01 100.0% 86.4%
3987265 12.3.1.29 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_3 0.52 42.0 3.12e-01 91.1% 87.0%
4954924 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 44.0 3.87e-01 100.0% 63.3%
4944280 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 43.0 4.18e-01 99.0% 84.5%
3768503 10.3.1.2 beta sandwiches › jelly-roll › TNF-like › TNF-like › C1q 0.51 44.0 4.01e-01 100.0% 92.4%
3942442 12.3.1.25 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.51 35.0 2.66e-01 72.3% 91.4%
4368632 10.32.1.266 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GldH_lipo 0.50 45.0 4.07e-01 100.0% 82.0%