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IMGVR_UViG_3300022230_000116-3300022230-Ga0192807_10075410
Arc-VirIMGVR_UViG_3300022230_000116-3300022230-Ga0192807_10075410
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-120
Domain cluster:
rep: IMGVR_UViG_3300010332_000231-3300010332-Ga0116200_1000007415__D207-322
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13385.14 best | Laminin_G_3 | 72.6 | 5.80e-20 | 71.7% | 49.7% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jkbA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.84 | 61.0 | 5.14e-01 | 75.0% | 52.1% |
| 4dqaA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.82 | 64.0 | 5.20e-01 | 81.7% | 53.6% |
| 3pvnA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 62.0 | 5.04e-01 | 80.0% | 52.4% |
| 1a8dA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.80 | 60.0 | 4.61e-01 | 77.5% | 39.4% |
| 2v73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.78 | 58.0 | 4.92e-01 | 75.8% | 51.4% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 57.0 | 4.49e-01 | 77.5% | 41.3% |
| 3tojA01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.58 | 40.0 | 3.56e-01 | 70.8% | 52.9% |
| 4xw3A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.55 | 39.0 | 3.37e-01 | 73.3% | 48.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060668 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.90 | 65.0 | 5.17e-01 | 76.7% | 40.9% |
| 5059716 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.89 | 64.0 | 5.14e-01 | 76.7% | 41.9% |
| 4941646 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.89 | 64.0 | 4.99e-01 | 75.8% | 37.9% |
| 5030605 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.88 | 63.0 | 5.90e-01 | 75.8% | 62.1% |
| 4940720 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.87 | 62.0 | 4.08e-01 | 73.3% | 20.0% |
| 3244250 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.86 | 66.0 | 4.98e-01 | 80.0% | 51.7% |
| 4941022 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.86 | 63.0 | 4.94e-01 | 77.5% | 40.0% |
| 4968734 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.85 | 63.0 | 5.16e-01 | 76.7% | 45.4% |
| 2029622 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.85 | 60.0 | 4.86e-01 | 75.8% | 42.0% |
| 4030689 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.84 | 64.0 | 5.43e-01 | 79.2% | 53.5% |
| 5080223 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.83 | 59.0 | 4.77e-01 | 74.2% | 41.4% |
| 4970419 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.83 | 60.0 | 4.76e-01 | 76.7% | 40.5% |
| 3779878 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.80 | 62.0 | 5.55e-01 | 80.0% | 66.3% |
| 3701432 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.72 | 54.0 | 5.67e-01 | 77.5% | 90.0% |
| 3585077 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.71 | 49.0 | 4.96e-01 | 79.2% | 70.8% |
| 3995842 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.61 | 47.0 | 3.96e-01 | 100.0% | 50.0% |
| 3791045 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.60 | 42.0 | 3.96e-01 | 70.0% | 60.0% |
| 3704678 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.60 | 43.0 | 3.90e-01 | 75.0% | 59.4% |
| 1721532 | 3733.1.1.1 ↗ | a+b complex topology › Orbivirus outer capsid protein VP5 › Orbivirus outer capsid protein VP5 › Orbivirus outer capsid protein VP5 › Orbi_VP5 | 0.53 | 47.0 | 3.15e-01 | 100.0% | 66.3% |
| 3928614 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 35.0 | 3.14e-01 | 70.8% | 72.1% |