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IMGVR_UViG_3300022401_000221-3300022401-Ga0216348_100000913
Arc-VirIMGVR_UViG_3300022401_000221-3300022401-Ga0216348_100000913
Identity
- Kingdom:
- archaea
Quality
77.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 74-148
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ecbA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 46.0 | 5.40e-01 | 70.7% | 94.1% |
| 1uhsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 46.0 | 5.37e-01 | 70.7% | 90.7% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 47.0 | 4.89e-01 | 72.0% | 73.5% |
| 1zq3P00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 45.0 | 4.73e-01 | 73.3% | 73.5% |
| 1lfuP00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 50.0 | 4.90e-01 | 78.7% | 73.2% |
| 1bw5A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 43.0 | 4.56e-01 | 73.3% | 75.8% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 45.0 | 4.60e-01 | 73.3% | 85.9% |
| 1xqoA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.64 | 47.0 | 4.06e-01 | 77.3% | 88.1% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 45.0 | 4.53e-01 | 86.7% | 70.5% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 42.0 | 4.43e-01 | 70.7% | 77.3% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.62 | 47.0 | 3.78e-01 | 80.0% | 43.4% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.62 | 50.0 | 4.77e-01 | 89.3% | 88.6% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.61 | 34.0 | 3.69e-01 | 84.0% | 64.1% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 40.0 | 4.26e-01 | 97.3% | 78.8% |
| 3mbhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 42.0 | 2.91e-01 | 80.0% | 67.1% |
| 2mgqA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 39.0 | 4.06e-01 | 73.3% | 79.4% |
| 2lxlA00 | 1.25.40.270 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 | 0.57 | 42.0 | 3.20e-01 | 96.0% | 35.6% |
| 4lxjA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 47.0 | 3.08e-01 | 100.0% | 53.5% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 40.0 | 3.96e-01 | 86.7% | 72.2% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 46.0 | 4.05e-01 | 96.0% | 71.8% |
| 3nf4A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 43.0 | 3.76e-01 | 88.0% | 67.2% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.54 | 45.0 | 3.59e-01 | 93.3% | 62.6% |
| 4b94A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.53 | 47.0 | 3.83e-01 | 100.0% | 60.3% |
| 4i5lB01 | 1.10.238.230 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.53 | 44.0 | 4.15e-01 | 100.0% | 83.0% |
| 4s1hA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 43.0 | 3.00e-01 | 100.0% | 93.7% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 39.0 | 4.02e-01 | 92.0% | 91.5% |
| 3l24B02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.50 | 40.0 | 2.84e-01 | 89.3% | 66.5% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3911740 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.73 | 48.0 | 5.48e-01 | 70.7% | 92.7% |
| 3507888 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.72 | 47.0 | 4.70e-01 | 70.7% | 65.3% |
| 45208 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.72 | 48.0 | 5.31e-01 | 70.7% | 88.1% |
| 3947986 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.72 | 50.0 | 5.51e-01 | 89.3% | 90.0% |
| 4213222 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.71 | 48.0 | 5.19e-01 | 70.7% | 84.4% |
| 162321 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.71 | 49.0 | 4.79e-01 | 77.3% | 65.1% |
| 4683153 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.71 | 48.0 | 4.38e-01 | 72.0% | 53.0% |
| 4091947 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.70 | 48.0 | 5.10e-01 | 72.0% | 81.5% |
| 4991449 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.70 | 60.0 | 4.72e-01 | 96.0% | 53.8% |
| 4586835 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.70 | 48.0 | 5.07e-01 | 70.7% | 83.1% |
| 3665049 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.70 | 47.0 | 4.35e-01 | 70.7% | 54.7% |
| 3997838 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.69 | 45.0 | 4.84e-01 | 70.7% | 75.4% |
| None | — | 0.69 | 45.0 | 4.49e-01 | 72.0% | 62.5% | |
| 3528634 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.69 | 47.0 | 4.58e-01 | 70.7% | 63.5% |
| 4275568 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.69 | 47.0 | 4.85e-01 | 73.3% | 75.7% |
| 3366636 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.68 | 47.0 | 5.01e-01 | 90.7% | 84.6% |
| 3420347 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.68 | 45.0 | 4.32e-01 | 70.7% | 60.0% |
| 4068007 | 101.1.2.233 ↗ | alpha arrays › HTH › HTH › winged helix domain › NirdL-like_HTH | 0.68 | 40.0 | 4.17e-01 | 74.7% | 62.9% |
| 3767171 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.67 | 50.0 | 4.64e-01 | 78.7% | 65.3% |
| 4939640 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.66 | 39.0 | 4.27e-01 | 73.3% | 71.7% |
| 3768461 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.66 | 50.0 | 4.81e-01 | 80.0% | 72.9% |
| 3869797 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.66 | 50.0 | 5.14e-01 | 80.0% | 88.6% |
| 3844546 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.66 | 46.0 | 4.80e-01 | 98.7% | 78.6% |
| 4003455 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.65 | 53.0 | 5.24e-01 | 89.3% | 97.5% |
| 3243458 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.65 | 44.0 | 4.54e-01 | 74.7% | 75.7% |
| 3177091 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.65 | 49.0 | 5.06e-01 | 81.3% | 90.0% |
| 163004 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.64 | 45.0 | 4.60e-01 | 73.3% | 85.9% |
| 4155556 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.64 | 48.0 | 4.62e-01 | 78.7% | 83.5% |
| 3424245 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.64 | 46.0 | 5.06e-01 | 89.3% | 96.7% |
| 3243454 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 46.0 | 5.00e-01 | 93.3% | 96.7% |
| 3442515 | 101.1.1.269 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7769 | 0.60 | 47.0 | 4.66e-01 | 94.7% | 80.0% |
| 3703539 | 130.1.2.1 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › ribosome-binding domain of Mdm38 › LETM1_RBD | 0.60 | 51.0 | 3.88e-01 | 98.7% | 39.5% |
| 3181966 | 509.1.1.13 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › SAGA-Tad1 | 0.58 | 40.0 | 4.08e-01 | 72.0% | 76.0% |
| 3388455 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.57 | 40.0 | 3.51e-01 | 73.3% | 82.6% |
| 3268699 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.57 | 44.0 | 4.52e-01 | 84.0% | 93.2% |
| 5046018 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.56 | 42.0 | 4.12e-01 | 85.3% | 73.8% |
| 3622358 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 43.0 | 4.05e-01 | 93.3% | 67.4% |
| 3453225 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.55 | 46.0 | 3.65e-01 | 97.3% | 61.1% |
| 4944767 | 101.1.2.883 ↗ | alpha arrays › HTH › HTH › winged helix domain › Radical_SAM | 0.55 | 38.0 | 3.84e-01 | 73.3% | 88.0% |
| 3940746 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.54 | 37.0 | 2.85e-01 | 74.7% | 52.5% |
| 3237430 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 46.0 | 2.98e-01 | 100.0% | 68.3% |
| 4284151 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 40.0 | 3.91e-01 | 88.0% | 81.2% |
| 3786570 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.51 | 42.0 | 2.97e-01 | 94.7% | 47.7% |
| 3923423 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.50 | 40.0 | 3.75e-01 | 88.0% | 72.0% |
| 3503616 | 590.1.1.1 ↗ | alpha bundles › Citrobacter dihydroxyacetone kinase extra ATP-binding domain › Citrobacter dihydroxyacetone kinase extra ATP-binding domain › Citrobacter dihydroxyacetone kinase extra ATP-binding domain › Dak2 | 0.50 | 39.0 | 2.85e-01 | 86.7% | 29.2% |