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IMGVR_UViG_3300022524_000126-3300022524-Ga0224534_10055578
Arc-VirIMGVR_UViG_3300022524_000126-3300022524-Ga0224534_10055578
Identity
- Kingdom:
- archaea
Quality
97.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-63
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13483.13 best | Lactamase_B_3 | 52.6 | 7.40e-14 | 100.0% | 34.4% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vjnA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.90 | 74.0 | 5.02e-01 | 100.0% | 27.3% |
| 3kl7A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.81 | 74.0 | 4.94e-01 | 100.0% | 29.1% |
| 4zo2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.81 | 74.0 | 4.64e-01 | 100.0% | 40.3% |
| 2r2dA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.81 | 74.0 | 4.70e-01 | 100.0% | 45.3% |
| 3aj3A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.80 | 72.0 | 4.64e-01 | 100.0% | 39.9% |
| 6hrgA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.80 | 72.0 | 4.77e-01 | 100.0% | 30.0% |
| 2xr1A03 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.78 | 69.0 | 4.50e-01 | 100.0% | 30.9% |
| 3eshA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.77 | 68.0 | 4.47e-01 | 100.0% | 47.7% |
| 2i7tA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.77 | 68.0 | 4.45e-01 | 100.0% | 31.5% |
| 2az4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.76 | 67.0 | 4.38e-01 | 100.0% | 38.0% |
| 2i7xA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.76 | 67.0 | 4.34e-01 | 100.0% | 30.1% |
| 3zwfA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.75 | 68.0 | 4.41e-01 | 100.0% | 32.4% |
| 1m2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.75 | 67.0 | 4.52e-01 | 100.0% | 37.4% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.74 | 67.0 | 4.49e-01 | 100.0% | 36.6% |
| 6j4nC01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.74 | 66.0 | 4.08e-01 | 100.0% | 25.5% |
| 4ad9A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.74 | 65.0 | 4.51e-01 | 100.0% | 43.1% |
| 1dxkA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.74 | 66.0 | 4.45e-01 | 100.0% | 37.1% |
| 2iexA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.66 | 57.0 | 4.09e-01 | 100.0% | 47.9% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 55.0 | 3.56e-01 | 100.0% | 41.3% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.58 | 33.0 | 2.58e-01 | 83.6% | 24.6% |
| 3qfmA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 46.0 | 3.03e-01 | 91.8% | 26.7% |
| 4i9fA03 | 3.30.300.290 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.54 | 42.0 | 3.98e-01 | 90.2% | 90.9% |
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.50 | 41.0 | 2.38e-01 | 100.0% | 10.4% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.50 | 43.0 | 3.31e-01 | 100.0% | 82.6% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999192 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.97 | 93.0 | 6.08e-01 | 100.0% | 28.8% |
| 5059450 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.96 | 91.0 | 5.89e-01 | 100.0% | 31.1% |
| 4994775 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.95 | 90.0 | 5.88e-01 | 100.0% | 29.3% |
| 4938414 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.89 | 83.0 | 5.54e-01 | 100.0% | 29.0% |
| 5054512 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.86 | 79.0 | 5.29e-01 | 100.0% | 34.0% |
| 5075825 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.86 | 79.0 | 5.19e-01 | 100.0% | 28.4% |
| 5046887 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.84 | 79.0 | 5.26e-01 | 100.0% | 29.8% |
| 5045780 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.84 | 78.0 | 5.08e-01 | 100.0% | 27.8% |
| 5029445 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.84 | 76.0 | 5.07e-01 | 100.0% | 35.1% |
| 4978425 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.84 | 77.0 | 5.10e-01 | 100.0% | 27.9% |
| 4937499 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.83 | 76.0 | 5.12e-01 | 100.0% | 29.0% |
| 4149881 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.83 | 76.0 | 5.01e-01 | 100.0% | 29.4% |
| 4373678 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.83 | 75.0 | 5.01e-01 | 100.0% | 30.2% |
| 4665964 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.83 | 75.0 | 4.94e-01 | 100.0% | 29.8% |
| 4513457 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.83 | 75.0 | 4.98e-01 | 100.0% | 29.8% |
| 4946453 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.82 | 76.0 | 5.01e-01 | 100.0% | 28.2% |
| 137964 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.81 | 74.0 | 4.96e-01 | 100.0% | 29.6% |
| 5017008 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.81 | 73.0 | 4.75e-01 | 100.0% | 29.8% |
| 4974332 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.81 | 75.0 | 5.04e-01 | 100.0% | 29.9% |
| 4947361 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.80 | 72.0 | 4.69e-01 | 100.0% | 29.5% |
| 4992155 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.80 | 72.0 | 4.71e-01 | 100.0% | 30.3% |
| 4112513 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.80 | 74.0 | 4.93e-01 | 100.0% | 29.5% |
| 5001877 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.80 | 74.0 | 4.91e-01 | 100.0% | 29.8% |
| 5022776 | 247.1.1.28 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL | 0.80 | 70.0 | 4.74e-01 | 100.0% | 28.2% |
| 5072053 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.79 | 71.0 | 4.50e-01 | 100.0% | 27.1% |
| 4943572 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.79 | 71.0 | 4.48e-01 | 100.0% | 27.7% |
| 4964862 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.79 | 72.0 | 4.72e-01 | 100.0% | 26.9% |
| 4525490 | 247.1.1.24 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 | 0.79 | 72.0 | 4.68e-01 | 100.0% | 25.4% |
| 4929475 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.79 | 71.0 | 4.63e-01 | 100.0% | 30.2% |
| 5058163 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.79 | 70.0 | 4.61e-01 | 100.0% | 30.4% |
| 5050429 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.79 | 71.0 | 4.47e-01 | 100.0% | 25.5% |
| 3603049 | 247.1.1.2 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,RMMBL | 0.79 | 71.0 | 4.65e-01 | 100.0% | 28.6% |
| 5076188 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.78 | 70.0 | 4.58e-01 | 100.0% | 30.2% |
| 4467064 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.78 | 71.0 | 4.69e-01 | 100.0% | 26.4% |
| 4936850 | 247.1.1.28 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL | 0.78 | 70.0 | 4.43e-01 | 100.0% | 27.8% |
| 3283059 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.78 | 70.0 | 4.75e-01 | 100.0% | 30.8% |
| 5056673 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.77 | 70.0 | 4.57e-01 | 100.0% | 29.8% |
| 4940249 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.77 | 69.0 | 4.55e-01 | 100.0% | 31.8% |
| 5036392 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.77 | 70.0 | 4.65e-01 | 100.0% | 28.7% |
| 5082100 | 247.1.1.28 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL | 0.77 | 67.0 | 4.49e-01 | 100.0% | 30.3% |
| 3164938 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.77 | 68.0 | 4.43e-01 | 100.0% | 29.5% |
| 4979221 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.77 | 68.0 | 4.55e-01 | 100.0% | 28.5% |
| 5023027 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.76 | 68.0 | 4.37e-01 | 100.0% | 31.0% |
| 3512515 | 247.1.1.45 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, RMMBL, Lactamase_B_2 | 0.74 | 65.0 | 4.09e-01 | 100.0% | 26.5% |
| 4992268 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.72 | 63.0 | 4.13e-01 | 98.4% | 25.0% |
| 3596706 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.66 | 56.0 | 3.55e-01 | 100.0% | 25.4% |
| 3400099 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 56.0 | 3.72e-01 | 100.0% | 31.2% |
| 3718095 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.60 | 52.0 | 3.45e-01 | 100.0% | 29.1% |
| 4983181 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 45.0 | 3.61e-01 | 98.4% | 75.8% |