←Back to structures
IMGVR_UViG_3300022547_000006-3300022547-Ga0212126_100068337
Arc-VirIMGVR_UViG_3300022547_000006-3300022547-Ga0212126_100068337
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-57
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.89 | 77.0 | 6.37e-01 | 92.6% | 75.3% |
| 2jt1A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.88 | 80.0 | 7.21e-01 | 98.1% | 100.0% |
| 2x4hA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.87 | 73.0 | 5.38e-01 | 90.7% | 48.8% |
| 3cdlA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.86 | 75.0 | 7.57e-01 | 94.4% | 100.0% |
| 4cgrB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.86 | 79.0 | 5.28e-01 | 100.0% | 59.2% |
| 3vuqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.86 | 76.0 | 5.19e-01 | 96.3% | 32.4% |
| 2qtqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.86 | 70.0 | 4.67e-01 | 88.9% | 26.9% |
| 1ku2A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.85 | 73.0 | 7.18e-01 | 94.4% | 93.0% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 74.0 | 7.25e-01 | 94.4% | 89.5% |
| 3egqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.84 | 70.0 | 4.89e-01 | 90.7% | 33.5% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 76.0 | 6.97e-01 | 98.1% | 77.6% |
| 2zcxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.84 | 73.0 | 4.85e-01 | 96.3% | 28.3% |
| 1z05A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 76.0 | 6.83e-01 | 98.1% | 100.0% |
| 2gauA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 68.0 | 5.89e-01 | 88.9% | 86.4% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.83 | 73.0 | 4.91e-01 | 98.1% | 30.9% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.82 | 73.0 | 7.17e-01 | 98.1% | 98.3% |
| 2gfnA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.82 | 70.0 | 4.69e-01 | 92.6% | 28.6% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 72.0 | 6.51e-01 | 98.1% | 89.0% |
| 2dt5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 71.0 | 6.48e-01 | 100.0% | 91.8% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 68.0 | 6.48e-01 | 92.6% | 98.4% |
| 2o0yB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 73.0 | 6.82e-01 | 100.0% | 100.0% |
| 3jsjC00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.80 | 66.0 | 4.51e-01 | 90.7% | 29.5% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 68.0 | 4.99e-01 | 94.4% | 48.6% |
| 7l1iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 71.0 | 4.99e-01 | 96.3% | 49.0% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 70.0 | 5.21e-01 | 96.3% | 54.3% |
| 3oopA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 72.0 | 5.18e-01 | 96.3% | 50.0% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.79 | 72.0 | 5.21e-01 | 100.0% | 90.8% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.79 | 71.0 | 4.68e-01 | 98.1% | 29.8% |
| 6oinA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 68.0 | 6.29e-01 | 94.4% | 91.0% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 67.0 | 6.07e-01 | 94.4% | 90.4% |
| 3e6mA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 4.99e-01 | 96.3% | 45.9% |
| 2dk5A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 70.0 | 6.48e-01 | 96.3% | 100.0% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 69.0 | 4.95e-01 | 98.1% | 43.3% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 65.0 | 6.78e-01 | 96.3% | 98.0% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 66.0 | 5.80e-01 | 92.6% | 79.5% |
| 1u2wD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 63.0 | 5.21e-01 | 92.6% | 51.1% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 4.85e-01 | 96.3% | 51.7% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 68.0 | 5.08e-01 | 96.3% | 57.9% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 54.0 | 5.46e-01 | 87.0% | 74.1% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 4.88e-01 | 96.3% | 55.5% |
| 3gw2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 65.0 | 5.34e-01 | 92.6% | 68.8% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 63.0 | 5.98e-01 | 90.7% | 100.0% |
| 3keoA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 6.08e-01 | 100.0% | 93.1% |
| 1j5yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 66.0 | 6.26e-01 | 98.1% | 96.9% |
| 8amzO01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.76 | 66.0 | 4.04e-01 | 100.0% | 20.0% |
| 4rgxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 65.0 | 4.83e-01 | 96.3% | 47.8% |
| 3e7qA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 66.0 | 4.42e-01 | 100.0% | 27.9% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 54.0 | 5.79e-01 | 94.4% | 93.3% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.73 | 53.0 | 5.25e-01 | 90.7% | 75.0% |
| 4a6dA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 62.0 | 5.21e-01 | 98.1% | 72.3% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 54.0 | 5.15e-01 | 90.7% | 69.8% |
| 1dulA00 | 1.10.260.30 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain | 0.72 | 61.0 | 5.64e-01 | 92.6% | 79.4% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.71 | 51.0 | 3.80e-01 | 87.0% | 29.1% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 59.0 | 5.31e-01 | 92.6% | 67.1% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 4.29e-01 | 90.7% | 49.6% |
| 1x1aA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 4.15e-01 | 94.4% | 35.0% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.45e-01 | 98.1% | 93.3% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.70 | 57.0 | 5.69e-01 | 98.1% | 89.3% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 5.11e-01 | 100.0% | 65.9% |
| 2eljA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 56.0 | 5.18e-01 | 98.1% | 100.0% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 57.0 | 3.85e-01 | 98.1% | 50.2% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 58.0 | 4.99e-01 | 98.1% | 78.6% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 55.0 | 5.53e-01 | 94.4% | 96.4% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 57.0 | 4.98e-01 | 98.1% | 80.2% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.65 | 57.0 | 4.80e-01 | 100.0% | 58.5% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 55.0 | 4.47e-01 | 100.0% | 51.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 53.0 | 4.45e-01 | 100.0% | 55.3% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 56.0 | 4.06e-01 | 100.0% | 51.0% |
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 43.0 | 4.39e-01 | 75.9% | 73.6% |
| 2o35A00 | 1.10.3340.10 | Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like | 0.61 | 46.0 | 4.13e-01 | 83.3% | 62.0% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 52.0 | 3.65e-01 | 100.0% | 60.0% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 51.0 | 5.04e-01 | 100.0% | 96.6% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.60 | 46.0 | 4.22e-01 | 92.6% | 79.7% |
| 3f2bA08 | 1.10.150.870 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.56 | 43.0 | 3.31e-01 | 87.0% | 89.8% |
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 43.0 | 3.13e-01 | 90.7% | 83.2% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3644937 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.94 | 83.0 | 5.67e-01 | 92.6% | 31.2% |
| 5083086 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.93 | 73.0 | 7.37e-01 | 90.7% | 83.3% |
| 3429968 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.92 | 81.0 | 7.36e-01 | 94.4% | 72.9% |
| 5048345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.91 | 77.0 | 6.19e-01 | 90.7% | 66.3% |
| 4991142 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.91 | 84.0 | 7.19e-01 | 98.1% | 87.5% |
| 4160122 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.91 | 75.0 | 5.30e-01 | 90.7% | 32.0% |
| 3428775 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 80.0 | 4.80e-01 | 94.4% | 16.2% |
| 3280166 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.90 | 79.0 | 7.64e-01 | 94.4% | 85.0% |
| 4954772 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.90 | 77.0 | 7.67e-01 | 90.7% | 94.5% |
| 3826046 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.90 | 77.0 | 5.31e-01 | 92.6% | 30.3% |
| 3664503 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.90 | 79.0 | 7.18e-01 | 94.4% | 91.4% |
| None | — | 0.90 | 78.0 | 4.87e-01 | 92.6% | 20.4% | |
| 4443954 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.90 | 77.0 | 6.63e-01 | 92.6% | 82.5% |
| 4238054 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.90 | 77.0 | 4.87e-01 | 92.6% | 20.4% |
| 3350525 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.89 | 77.0 | 7.20e-01 | 94.4% | 76.9% |
| 3347305 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.89 | 77.0 | 5.27e-01 | 92.6% | 30.3% |
| 4663875 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.89 | 73.0 | 4.60e-01 | 87.0% | 19.6% |
| 4056597 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.89 | 78.0 | 4.72e-01 | 94.4% | 16.6% |
| 4988046 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.89 | 73.0 | 7.53e-01 | 90.7% | 96.0% |
| 5040366 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.88 | 82.0 | 7.88e-01 | 100.0% | 93.3% |
| 4233279 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.88 | 76.0 | 4.78e-01 | 92.6% | 22.1% |
| 4876273 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.87 | 73.0 | 6.77e-01 | 90.7% | 73.1% |
| 4388780 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.87 | 75.0 | 5.34e-01 | 92.6% | 35.9% |
| 4032673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.87 | 74.0 | 4.69e-01 | 92.6% | 20.4% |
| 4060124 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.87 | 76.0 | 5.30e-01 | 94.4% | 33.5% |
| 4026959 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.87 | 74.0 | 4.42e-01 | 92.6% | 15.5% |
| 3303765 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.87 | 77.0 | 5.33e-01 | 94.4% | 31.9% |
| 3297365 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.87 | 74.0 | 5.10e-01 | 92.6% | 30.2% |
| None | — | 0.86 | 75.0 | 4.46e-01 | 94.4% | 14.9% | |
| 4056602 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.86 | 75.0 | 5.08e-01 | 94.4% | 29.7% |
| 4086835 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.86 | 74.0 | 6.45e-01 | 94.4% | 65.0% |
| 4322147 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 74.0 | 4.24e-01 | 94.4% | 10.7% |
| 3980765 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 74.0 | 5.13e-01 | 94.4% | 31.5% |
| 4253265 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.86 | 74.0 | 5.13e-01 | 94.4% | 31.5% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 75.0 | 5.43e-01 | 96.3% | 55.7% |
| 5014461 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.85 | 67.0 | 7.25e-01 | 88.9% | 100.0% |
| 4339699 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.85 | 72.0 | 7.25e-01 | 92.6% | 92.7% |
| 3611141 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.85 | 70.0 | 6.06e-01 | 88.9% | 73.8% |
| 3284984 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.85 | 72.0 | 4.52e-01 | 94.4% | 19.7% |
| 4550123 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.85 | 73.0 | 7.08e-01 | 94.4% | 86.7% |
| 3329805 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.84 | 73.0 | 5.05e-01 | 92.6% | 32.5% |
| 3948820 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.84 | 71.0 | 5.96e-01 | 94.4% | 55.6% |
| 2439 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.84 | 74.0 | 7.25e-01 | 94.4% | 89.5% |
| 4391471 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.84 | 71.0 | 7.09e-01 | 90.7% | 90.9% |
| 3978620 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.84 | 71.0 | 4.94e-01 | 94.4% | 30.3% |
| 3311634 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.84 | 72.0 | 7.17e-01 | 92.6% | 92.7% |
| 3284461 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 71.0 | 4.50e-01 | 94.4% | 20.0% |
| 3288971 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.84 | 71.0 | 5.04e-01 | 92.6% | 33.3% |
| 3711450 | 101.1.15.0 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain | 0.84 | 68.0 | 5.87e-01 | 87.0% | 76.2% |
| 3280723 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.83 | 70.0 | 5.89e-01 | 94.4% | 55.6% |
| 5063691 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.83 | 77.0 | 6.49e-01 | 100.0% | 80.0% |
| 3662905 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.83 | 71.0 | 7.08e-01 | 92.6% | 90.9% |
| 5038207 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 76.0 | 5.74e-01 | 100.0% | 51.7% |
| 4148139 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.83 | 72.0 | 5.07e-01 | 94.4% | 33.5% |
| 4367442 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 74.0 | 5.41e-01 | 100.0% | 50.7% |
| 3283805 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.83 | 75.0 | 6.84e-01 | 100.0% | 81.4% |
| 3386629 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 69.0 | 6.23e-01 | 94.4% | 72.0% |
| 2435 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.82 | 68.0 | 6.02e-01 | 90.7% | 66.2% |
| 4253264 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.82 | 70.0 | 6.19e-01 | 92.6% | 72.0% |
| 4131842 | 101.1.3.25 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r3 | 0.82 | 70.0 | 6.18e-01 | 92.6% | 72.0% |
| 5032450 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 68.0 | 5.46e-01 | 90.7% | 69.0% |
| 4452303 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 69.0 | 6.52e-01 | 94.4% | 83.1% |
| 4076621 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.81 | 64.0 | 6.67e-01 | 87.0% | 98.0% |
| 3663639 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.81 | 70.0 | 4.82e-01 | 94.4% | 30.2% |
| 3961207 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.81 | 72.0 | 6.41e-01 | 98.1% | 89.3% |
| 3971933 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.80 | 67.0 | 6.30e-01 | 90.7% | 81.5% |
| 4269761 | 142.1.1.1 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r1_2,Sigma70_r2 | 0.80 | 72.0 | 4.80e-01 | 98.1% | 37.4% |
| 4518420 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.80 | 67.0 | 6.29e-01 | 90.7% | 78.5% |
| None | — | 0.79 | 66.0 | 4.70e-01 | 90.7% | 34.0% | |
| 4999189 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 64.0 | 5.43e-01 | 90.7% | 67.8% |
| 3286793 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.79 | 69.0 | 5.10e-01 | 100.0% | 52.9% |
| 4025539 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.79 | 68.0 | 6.15e-01 | 100.0% | 94.7% |
| 3587729 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 69.0 | 5.91e-01 | 98.1% | 84.7% |
| 5054801 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.78 | 68.0 | 5.78e-01 | 100.0% | 77.8% |
| 3290705 | 101.1.2.81 ↗ | alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N | 0.78 | 68.0 | 5.88e-01 | 100.0% | 77.6% |
| 3360961 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.77 | 63.0 | 4.34e-01 | 88.9% | 29.1% |
| 4094272 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.77 | 65.0 | 6.48e-01 | 92.6% | 100.0% |
| 3989015 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 64.0 | 5.14e-01 | 92.6% | 65.7% |
| 3668668 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.77 | 63.0 | 4.82e-01 | 90.7% | 40.8% |
| 5070203 | 109.4.1.202 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 | 0.77 | 63.0 | 3.77e-01 | 96.3% | 13.2% |
| 3459967 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.76 | 62.0 | 4.78e-01 | 88.9% | 43.2% |
| 3664504 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.76 | 62.0 | 4.40e-01 | 88.9% | 32.3% |
| 3277668 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.76 | 63.0 | 6.30e-01 | 92.6% | 100.0% |
| 3279079 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.76 | 64.0 | 5.76e-01 | 100.0% | 72.5% |
| 4142269 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.76 | 65.0 | 6.54e-01 | 96.3% | 100.0% |
| 3339567 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.75 | 67.0 | 4.57e-01 | 98.1% | 58.3% |
| 3299379 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.72 | 58.0 | 4.27e-01 | 90.7% | 34.0% |
| 3969486 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 61.0 | 6.07e-01 | 96.3% | 100.0% |
| 3662896 | 101.1.1.411 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 | 0.72 | 58.0 | 4.47e-01 | 90.7% | 40.8% |
| 5048947 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 59.0 | 4.99e-01 | 100.0% | 56.0% |
| 3929142 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 55.0 | 5.41e-01 | 96.3% | 83.3% |
| 4061227 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.68 | 57.0 | 4.16e-01 | 98.1% | 42.5% |
| 5048234 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 58.0 | 5.40e-01 | 100.0% | 98.6% |
| 5031872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 55.0 | 5.37e-01 | 100.0% | 88.3% |
| 3729348 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.66 | 57.0 | 4.07e-01 | 100.0% | 62.9% |
| 3974067 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 49.0 | 5.22e-01 | 85.2% | 100.0% |
| 4947168 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 56.0 | 4.73e-01 | 100.0% | 56.7% |
| 4947863 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 56.0 | 4.73e-01 | 98.1% | 58.9% |
| 3330762 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.62 | 54.0 | 4.27e-01 | 98.1% | 47.0% |
D2
medium
residues 62-93
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ouvA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.82 | 68.0 | 3.99e-01 | 100.0% | 15.8% |
| 2d54A02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.65 | 51.0 | 3.62e-01 | 96.9% | 29.7% |