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IMGVR_UViG_3300022552_000529-3300022552-Ga0212118_100135173
Arc-VirIMGVR_UViG_3300022552_000529-3300022552-Ga0212118_100135173
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-50_143-154
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sd2A01 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 45.0 | 4.07e-01 | 84.7% | 62.3% |
| 4ypjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 3.80e-01 | 91.5% | 55.5% |
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 46.0 | 3.88e-01 | 86.4% | 54.3% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.55 | 45.0 | 4.06e-01 | 91.5% | 97.6% |
| 7k7jA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 3.96e-01 | 100.0% | 61.1% |
| 8alzB04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 45.0 | 3.69e-01 | 93.2% | 60.9% |
| 3lnlB02 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 47.0 | 4.16e-01 | 100.0% | 98.9% |
| 6dgiA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 43.0 | 3.36e-01 | 96.6% | 61.1% |
| 6p3xB01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 43.0 | 3.10e-01 | 93.2% | 53.1% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.52 | 43.0 | 3.60e-01 | 100.0% | 51.9% |
| 6qdwt00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 29.0 | 2.56e-01 | 100.0% | 30.1% |
| 2qngA01 | 2.60.60.30 | Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains | 0.52 | 41.0 | 3.16e-01 | 96.6% | 69.1% |
| 1pgl100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.18e-01 | 100.0% | 91.4% |
| 5b71E00 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.51 | 40.0 | 3.52e-01 | 88.1% | 59.1% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.51 | 44.0 | 3.26e-01 | 100.0% | 46.0% |
| 2cuwA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.50 | 40.0 | 3.68e-01 | 91.5% | 100.0% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.57e-01 | 94.9% | 85.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3737693 | 11.1.1.45 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 | 0.63 | 52.0 | 4.17e-01 | 91.5% | 66.1% |
| 4938900 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.60 | 50.0 | 3.78e-01 | 89.8% | 43.0% |
| 4938899 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.60 | 50.0 | 3.86e-01 | 91.5% | 61.5% |
| 1688016 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.60 | 53.0 | 3.63e-01 | 100.0% | 53.4% |
| 5039260 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.59 | 51.0 | 4.05e-01 | 93.2% | 52.2% |
| 2530507 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.59 | 53.0 | 3.54e-01 | 100.0% | 52.0% |
| 4963366 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.59 | 50.0 | 4.00e-01 | 91.5% | 53.6% |
| 3261455 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.58 | 49.0 | 3.76e-01 | 93.2% | 46.7% |
| 4996421 | 11.1.1.184 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Wzt_C | 0.58 | 48.0 | 3.66e-01 | 91.5% | 45.7% |
| 5036988 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.05e-01 | 93.2% | 54.3% |
| 4012690 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 3.48e-01 | 91.5% | 55.0% |
| 4065108 | 284.3.1.1 ↗ | a+b two layers › FKBP-like › Colicin E3 immunity protein › Colicin E3 immunity protein › Cloacin_immun | 0.57 | 47.0 | 4.21e-01 | 91.5% | 97.6% |
| 4427418 | 11.1.1.1229 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27268 | 0.57 | 49.0 | 4.11e-01 | 93.2% | 83.2% |
| 3540637 | 11.1.1.1003 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26194 | 0.57 | 48.0 | 3.58e-01 | 93.2% | 42.1% |
| 3397468 | 11.1.1.822 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF229 | 0.55 | 40.0 | 3.35e-01 | 100.0% | 43.8% |
| 3888374 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.22e-01 | 89.8% | 49.0% |
| 5042718 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 3.93e-01 | 88.1% | 72.0% |
| 3593279 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 40.0 | 2.66e-01 | 86.4% | 25.9% |
| 3274364 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.52 | 38.0 | 4.17e-01 | 83.1% | 93.9% |
| 3734570 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.52 | 45.0 | 2.73e-01 | 96.6% | 55.7% |
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.52 | 43.0 | 3.70e-01 | 89.8% | 66.7% |
| 4121299 | 1119.1.1.1 ↗ | a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW | 0.52 | 42.0 | 2.85e-01 | 94.9% | 26.7% |
| 3486476 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.65e-01 | 100.0% | 59.1% |
D2
medium
residues 51-142
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6grsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 5.06e-01 | 93.5% | 100.0% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.60 | 49.0 | 4.36e-01 | 92.4% | 94.2% |
| 3uc2A00 | 2.60.40.3340 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 | 0.59 | 49.0 | 4.51e-01 | 92.4% | 94.4% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 4.57e-01 | 89.1% | 99.0% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 48.0 | 4.80e-01 | 92.4% | 94.8% |
| 2j42A02 | 2.60.120.240 | Mainly Beta › Sandwich › Jelly Rolls › Protective antigen, heptamerisation domain | 0.58 | 48.0 | 3.84e-01 | 90.2% | 75.4% |
| 4kh9A01 | 2.60.40.3870 | Mainly Beta › Sandwich › Immunoglobulin-like › Uncharacterised protein PF16024, DUF4785 | 0.56 | 46.0 | 4.12e-01 | 90.2% | 94.7% |
| 4ehcA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 42.0 | 3.05e-01 | 90.2% | 27.1% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 4.44e-01 | 89.1% | 98.7% |
| 4ofkB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 4.30e-01 | 92.4% | 96.2% |
| 3dlqR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.34e-01 | 93.5% | 96.0% |
| 3cxeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 4.05e-01 | 90.2% | 100.0% |
| 3wuzA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 42.0 | 3.89e-01 | 95.7% | 100.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4033729 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.74 | 33.0 | 3.41e-01 | 92.4% | 42.7% |
| 3841182 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 53.0 | 5.13e-01 | 94.6% | 98.1% |
| 3253552 | 11.1.1.214 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Pur_ac_phosph_N | 0.63 | 53.0 | 5.10e-01 | 93.5% | 98.1% |
| 3926888 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 52.0 | 4.68e-01 | 95.7% | 98.5% |
| 4970307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 51.0 | 4.80e-01 | 93.5% | 99.1% |
| 3541117 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.60 | 52.0 | 4.98e-01 | 96.7% | 100.0% |
| 3966288 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.59e-01 | 90.2% | 100.0% |
| 5058421 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 51.0 | 4.69e-01 | 94.6% | 91.5% |
| 1146564 | 11.1.1.183 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4426 | 0.59 | 49.0 | 4.56e-01 | 92.4% | 97.5% |
| 4134479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.48e-01 | 88.0% | 99.1% |
| 3921175 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 45.0 | 4.46e-01 | 83.7% | 100.0% |
| 3786265 | 11.1.1.1187 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7076 | 0.59 | 46.0 | 4.26e-01 | 85.9% | 88.3% |
| 4871543 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.59 | 49.0 | 4.65e-01 | 92.4% | 84.4% |
| 4616192 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.58 | 47.0 | 4.39e-01 | 88.0% | 87.0% |
| 3526577 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.58 | 47.0 | 4.24e-01 | 90.2% | 77.7% |
| 5063361 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.54e-01 | 92.4% | 96.2% |
| 4487954 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 49.0 | 4.52e-01 | 98.9% | 89.2% |
| 4317931 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.56 | 43.0 | 4.52e-01 | 100.0% | 90.6% |
| 3227984 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.56 | 48.0 | 4.72e-01 | 95.7% | 100.0% |
| 1070874 | 11.1.1.300 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4785_3rd | 0.55 | 45.0 | 4.38e-01 | 90.2% | 98.0% |
| 3176450 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.54 | 44.0 | 4.24e-01 | 91.3% | 78.0% |
| 3875198 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.53 | 46.0 | 4.38e-01 | 97.8% | 90.9% |
| 5044479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 4.04e-01 | 89.1% | 95.2% |
| 3923858 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.70e-01 | 85.9% | 100.0% |
| 3229812 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.52 | 45.0 | 4.39e-01 | 97.8% | 94.2% |
| 3916836 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.51 | 42.0 | 4.34e-01 | 91.3% | 100.0% |
| 3628540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 4.04e-01 | 82.6% | 93.8% |
| 3917423 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.50 | 42.0 | 4.25e-01 | 93.5% | 93.3% |
| 3166677 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.50 | 35.0 | 3.61e-01 | 84.8% | 77.6% |