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IMGVR_UViG_3300022554_000046-3300022554-Ga0212093_100448221

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300022554_000046-3300022554-Ga0212093_100448221 ↗
Kingdom:: archaea

Quality

74.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-90

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3s6jE02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.64	31.0	3.51e-01	95.5%	58.0%
2au5A00	1.20.120.590	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like	0.59	42.0	3.71e-01	73.9%	85.3%
3djbA01	1.10.472.50	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like	0.57	41.0	4.06e-01	77.3%	100.0%
6bs3B01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.56	46.0	3.22e-01	92.0%	38.5%
1l3lA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	33.0	3.77e-01	98.9%	81.0%
3nufB00	1.10.1790.10	Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain	0.53	46.0	4.31e-01	98.9%	91.1%
2c35A00	1.20.1250.40	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit	0.53	37.0	3.26e-01	95.5%	49.2%
6dx5A00	3.90.70.80	Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A ›	0.52	43.0	3.50e-01	89.8%	65.7%
2f2cA02	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	42.0	4.08e-01	96.6%	87.7%
7p2yd01	1.10.520.20	Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase	0.50	40.0	3.94e-01	100.0%	79.8%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3729872	10.12.1.39 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2	0.59	46.0	3.69e-01	85.2%	80.4%
3218368	109.4.1.1142 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_IFT80_172	0.57	39.0	3.72e-01	77.3%	60.0%
4012343	4049.1.1.2 ↗	alpha superhelices › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › alpha-helical domain in siroheme synthase middle domains-like › Sirohm_synth_C	0.57	40.0	4.14e-01	98.9%	80.0%
3299452	633.4.1.1 ↗	alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI	0.54	40.0	3.42e-01	79.5%	94.7%
4311864	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.54	41.0	3.78e-01	89.8%	61.7%
2381	4285.1.1.1 ↗	alpha arrays › EF2947-like › EF2947-like › EF2947-like › DUF3206	0.53	37.0	3.39e-01	73.9%	85.9%
3735275	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.53	34.0	2.78e-01	93.2%	32.2%
4097778	191.1.1.10 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_6	0.52	42.0	3.59e-01	93.2%	53.8%
3199354	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.52	38.0	2.58e-01	78.4%	44.2%
4386395	563.1.1.1 ↗	alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP	0.50	40.0	3.89e-01	100.0%	79.0%