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IMGVR_UViG_3300022554_000046-3300022554-Ga0212093_100448227
Arc-VirIMGVR_UViG_3300022554_000046-3300022554-Ga0212093_100448227
Identity
- Kingdom:
- archaea
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-108
Domain cluster:
rep: IMGVR_UViG_3300009771_000005-3300009771-Ga0116155_1000038538__D3-99
D2
high
residues 249-313
Domain cluster:
rep: IMGVR_UViG_3300025005_000221-3300025005-Ga0210005_10088891__D68-122
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.62 | 46.0 | 3.42e-01 | 80.0% | 66.9% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 44.0 | 3.73e-01 | 81.5% | 47.4% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.58 | 49.0 | 2.88e-01 | 96.9% | 29.8% |
| 1vzrA01 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.56 | 43.0 | 3.71e-01 | 86.2% | 72.5% |
| 2bh8A02 | 6.20.370.20 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.56 | 26.0 | 3.29e-01 | 75.4% | 68.8% |
| 3ge5A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.53 | 38.0 | 2.92e-01 | 80.0% | 71.6% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.52 | 27.0 | 3.13e-01 | 89.2% | 67.4% |
| 1db3A02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.50 | 36.0 | 3.01e-01 | 75.4% | 75.9% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4638995 | 71.1.1.15 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 | 0.60 | 45.0 | 3.16e-01 | 80.0% | 66.5% |
| 4927177 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.55 | 49.0 | 3.74e-01 | 100.0% | 56.7% |
| 3485364 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 32.0 | 3.46e-01 | 87.7% | 78.0% |
| 3606882 | 109.22.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Survival of motor neuron protein-interacting protein 1 › Survival of motor neuron protein-interacting protein 1 | 0.51 | 44.0 | 3.07e-01 | 100.0% | 78.9% |
| 4993809 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.50 | 37.0 | 3.27e-01 | 80.0% | 95.0% |
D3
medium
residues 157-216