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IMGVR_UViG_3300022555_000046-3300022555-Ga0212088_1000074984
Arc-VirIMGVR_UViG_3300022555_000046-3300022555-Ga0212088_1000074984
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-99
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bh0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.88 | 65.0 | 4.10e-01 | 88.9% | 17.3% |
| 2cvhA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.77 | 49.0 | 3.36e-01 | 87.3% | 19.2% |
| 1nlfA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 54.0 | 3.59e-01 | 100.0% | 22.8% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.59 | 39.0 | 4.28e-01 | 92.1% | 95.7% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 35.0 | 3.46e-01 | 82.5% | 53.7% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 36.0 | 3.79e-01 | 90.5% | 70.2% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 35.0 | 3.38e-01 | 95.2% | 50.7% |
| 3io5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 46.0 | 3.01e-01 | 96.8% | 21.0% |
| 4ebgA00 | 3.10.450.560 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 43.0 | 3.82e-01 | 100.0% | 56.7% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 47.0 | 3.79e-01 | 100.0% | 91.5% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.54 | 42.0 | 3.62e-01 | 85.7% | 53.5% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 39.0 | 3.50e-01 | 93.7% | 52.0% |
| 2kzxA00 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.53 | 45.0 | 3.65e-01 | 100.0% | 78.6% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 2.93e-01 | 100.0% | 25.9% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 43.0 | 2.98e-01 | 93.7% | 35.3% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.52 | 41.0 | 3.38e-01 | 88.9% | 84.9% |
| 3biqA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.51 | 41.0 | 2.86e-01 | 100.0% | 81.8% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 34.0 | 3.23e-01 | 73.0% | 92.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2988376 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.70 | 48.0 | 3.26e-01 | 87.3% | 19.2% |
| 102166 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.66 | 55.0 | 3.63e-01 | 100.0% | 22.8% |
| 4940664 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.66 | 43.0 | 3.93e-01 | 90.5% | 49.4% |
| 3801858 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.62 | 44.0 | 4.55e-01 | 90.5% | 81.7% |
| 4987019 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 46.0 | 4.37e-01 | 100.0% | 70.7% |
| 3739035 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 41.0 | 4.25e-01 | 73.0% | 96.7% |
| 3609014 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.59 | 45.0 | 3.10e-01 | 82.5% | 59.1% |
| 1094905 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.59 | 35.0 | 3.46e-01 | 82.5% | 51.4% |
| 4959386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 34.0 | 3.77e-01 | 92.1% | 72.0% |
| 3621358 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.58 | 34.0 | 3.37e-01 | 82.5% | 52.3% |
| 3354564 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 45.0 | 4.66e-01 | 85.7% | 91.7% |
| 2574473 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 33.0 | 3.81e-01 | 84.1% | 87.8% |
| 3360403 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.56 | 41.0 | 4.53e-01 | 81.0% | 100.0% |
| 3273866 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.56 | 36.0 | 2.20e-01 | 93.7% | 8.6% |
| 3580647 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.56 | 39.0 | 2.41e-01 | 74.6% | 28.4% |
| 3967251 | 2004.1.1.514 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_29, SbcC_Walker_B | 0.55 | 44.0 | 2.62e-01 | 93.7% | 26.9% |
| 3986281 | 2004.1.1.514 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23, AAA_29, SbcC_Walker_B | 0.55 | 44.0 | 2.70e-01 | 93.7% | 31.4% |
| 3917113 | 304.9.1.63 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_PARP14_3 | 0.52 | 36.0 | 3.27e-01 | 87.3% | 51.8% |
| 3512228 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.52 | 37.0 | 4.00e-01 | 79.4% | 96.0% |
| 5028865 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 38.0 | 4.05e-01 | 88.9% | 100.0% |
| 3317848 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.51 | 42.0 | 2.73e-01 | 95.2% | 48.4% |
| 5039125 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.51 | 40.0 | 4.05e-01 | 88.9% | 87.7% |
| 4825684 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.50 | 44.0 | 4.09e-01 | 100.0% | 92.5% |
| 2573726 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.50 | 42.0 | 3.18e-01 | 100.0% | 39.5% |