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IMGVR_UViG_3300022666_000305-3300022666-Ga0248168_100493418

Arc-Vir

IMGVR_UViG_3300022666_000305-3300022666-Ga0248168_100493418

Identity

Kingdom:
archaea

Quality

73.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-142
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k8kC00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 42.0 2.92e-01 77.7% 52.3%
2l8oA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 40.0 3.63e-01 75.7% 71.5%
8cukB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 41.0 2.89e-01 77.7% 53.9%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 35.0 4.08e-01 95.1% 94.2%
3ijcA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 40.0 2.79e-01 78.6% 37.8%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 40.0 2.83e-01 77.7% 38.6%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.53 42.0 3.44e-01 88.3% 82.6%
1pguA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.93e-01 82.5% 98.5%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 37.0 3.55e-01 72.8% 75.0%
5hy7B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 38.0 2.57e-01 78.6% 49.8%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 3.10e-01 100.0% 82.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3691059 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.66 48.0 4.08e-01 76.7% 85.9%
3576905 11.1.1.1009 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26432 0.59 34.0 2.17e-01 94.2% 11.2%
144423 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.57 42.0 3.81e-01 76.7% 76.5%
3576335 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 42.0 2.92e-01 78.6% 57.1%
5054830 5.1.2.63 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › FG-GAP_3 0.56 39.0 2.91e-01 71.8% 58.7%
3629700 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 41.0 2.89e-01 77.7% 56.4%
4023075 5.1.4.383 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › VPS11_N 0.55 41.0 2.96e-01 78.6% 59.0%
3967996 223.1.1.76 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_7 0.55 45.0 4.38e-01 92.2% 80.0%
4634997 5.1.4.17 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N 0.55 46.0 2.73e-01 92.2% 24.5%
3480335 5.1.3.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.54 40.0 2.67e-01 77.7% 50.1%
3599964 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.53 39.0 2.61e-01 76.7% 43.0%
3483569 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.98e-01 93.2% 34.3%
3679683 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 38.0 2.28e-01 76.7% 19.1%
3413910 220.1.1.2 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.53 38.0 3.52e-01 75.7% 83.7%
3929699 5.1.4.244 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_2nd 0.53 39.0 2.86e-01 76.7% 60.0%
4012027 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 38.0 3.23e-01 75.7% 70.9%
5022781 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 37.0 2.59e-01 74.8% 33.3%
3397645 5.1.4.85 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NOL11_N 0.52 44.0 3.11e-01 92.2% 43.4%
4055924 223.1.1.76 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_7 0.52 45.0 4.23e-01 99.0% 76.9%
3698253 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.51 44.0 2.87e-01 94.2% 44.0%
3941341 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 38.0 2.46e-01 78.6% 80.4%
4011804 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.51 44.0 2.94e-01 95.1% 35.0%
3709736 5.1.4.238 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 0.51 44.0 3.05e-01 98.1% 34.3%
3169468 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 43.0 2.87e-01 92.2% 32.8%
3448016 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.50 37.0 2.45e-01 77.7% 30.2%
3742540 5.1.5.88 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.50 44.0 2.86e-01 95.1% 55.6%