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IMGVR_UViG_3300022666_000305-3300022666-Ga0248168_100493420
Arc-VirIMGVR_UViG_3300022666_000305-3300022666-Ga0248168_100493420
Identity
- Kingdom:
- archaea
Quality
92.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-53
Domain cluster:
representative
CATH (77)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zmbA02 | 6.10.170.10 | Special › Helix non-globular › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › | 0.98 | 65.0 | 7.69e-01 | 72.5% | 97.2% |
| 1dd5A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.92 | 83.0 | 6.25e-01 | 96.1% | 82.6% |
| 4oydB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.92 | 86.0 | 6.34e-01 | 100.0% | 83.8% |
| 4kb2A01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.92 | 84.0 | 6.33e-01 | 98.0% | 83.5% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.90 | 79.0 | 6.02e-01 | 96.1% | 82.6% |
| 2cr7A01 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.87 | 58.0 | 5.33e-01 | 72.5% | 55.6% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 60.0 | 5.69e-01 | 78.4% | 66.7% |
| 1zbpA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.80 | 65.0 | 5.50e-01 | 100.0% | 54.1% |
| 2fe1A00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.79 | 65.0 | 4.72e-01 | 88.2% | 52.3% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 54.0 | 5.24e-01 | 78.4% | 64.9% |
| 8ek4A01 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.79 | 68.0 | 5.07e-01 | 100.0% | 78.9% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.78 | 68.0 | 5.50e-01 | 100.0% | 64.6% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.77 | 66.0 | 5.82e-01 | 100.0% | 84.8% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.77 | 68.0 | 5.23e-01 | 100.0% | 72.8% |
| 2oqoA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.76 | 60.0 | 4.05e-01 | 86.3% | 90.6% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.75 | 63.0 | 5.01e-01 | 100.0% | 84.7% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.75 | 65.0 | 3.96e-01 | 100.0% | 40.9% |
| 5mdtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.74 | 62.0 | 4.55e-01 | 100.0% | 34.2% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.74 | 67.0 | 6.25e-01 | 100.0% | 85.5% |
| 1t7lB01 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.74 | 64.0 | 3.77e-01 | 96.1% | 20.6% |
| 3zxsC02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.73 | 63.0 | 4.51e-01 | 100.0% | 48.7% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.73 | 62.0 | 4.80e-01 | 100.0% | 59.7% |
| 5fgzA02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.72 | 57.0 | 3.96e-01 | 86.3% | 87.1% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.72 | 61.0 | 4.93e-01 | 100.0% | 77.4% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.72 | 61.0 | 4.28e-01 | 92.2% | 34.4% |
| 3fvvA02 | 1.20.1440.100 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function | 0.72 | 53.0 | 4.64e-01 | 82.4% | 53.3% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 50.0 | 4.70e-01 | 76.5% | 70.8% |
| 1tfkB00 | 1.20.120.650 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Colicin D | 0.71 | 64.0 | 5.33e-01 | 100.0% | 84.9% |
| 5c8aA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.71 | 60.0 | 5.28e-01 | 98.0% | 89.7% |
| 4flbA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.71 | 60.0 | 4.36e-01 | 92.2% | 36.6% |
| 2olvB02 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.70 | 64.0 | 4.26e-01 | 100.0% | 87.4% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 57.0 | 4.74e-01 | 100.0% | 87.3% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.69 | 47.0 | 4.15e-01 | 72.5% | 92.3% |
| 3fp3A01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 57.0 | 4.32e-01 | 100.0% | 37.8% |
| 2jaeA03 | 1.20.1440.240 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.68 | 52.0 | 4.12e-01 | 82.4% | 53.5% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.67 | 52.0 | 4.68e-01 | 92.2% | 60.0% |
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.67 | 58.0 | 3.29e-01 | 100.0% | 11.5% |
| 1jkvA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.66 | 56.0 | 3.84e-01 | 100.0% | 80.7% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.66 | 54.0 | 4.92e-01 | 100.0% | 87.8% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 47.0 | 4.15e-01 | 80.4% | 50.6% |
| 6mh4A03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 44.0 | 3.90e-01 | 70.6% | 46.8% |
| 6s6hA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.65 | 58.0 | 4.46e-01 | 98.0% | 64.2% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.65 | 46.0 | 3.39e-01 | 76.5% | 30.8% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 56.0 | 4.05e-01 | 100.0% | 75.7% |
| 6dv2G02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 54.0 | 3.71e-01 | 96.1% | 32.6% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 43.0 | 3.95e-01 | 70.6% | 89.6% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 45.0 | 3.91e-01 | 76.5% | 47.6% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.64 | 46.0 | 4.06e-01 | 82.4% | 50.6% |
| 2kkmA01 | 1.20.1440.170 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Translation machinery-associated protein 16-like | 0.64 | 49.0 | 3.75e-01 | 86.3% | 59.2% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.63 | 57.0 | 4.19e-01 | 100.0% | 41.1% |
| 3zdmB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.63 | 44.0 | 4.51e-01 | 78.4% | 80.0% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.62 | 49.0 | 4.60e-01 | 100.0% | 70.1% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 43.0 | 3.91e-01 | 72.5% | 63.2% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 48.0 | 4.50e-01 | 84.3% | 76.6% |
| 1d8cA03 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.62 | 52.0 | 3.98e-01 | 100.0% | 58.5% |
| 3nivC02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 51.0 | 3.97e-01 | 98.0% | 66.1% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 47.0 | 4.64e-01 | 94.1% | 82.1% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.62 | 44.0 | 3.82e-01 | 76.5% | 87.3% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.61 | 48.0 | 3.39e-01 | 90.2% | 70.0% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.61 | 45.0 | 4.66e-01 | 80.4% | 83.7% |
| 2ygwA01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.60 | 49.0 | 3.67e-01 | 100.0% | 66.7% |
| 2a8pA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 49.0 | 3.38e-01 | 94.1% | 27.1% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 43.0 | 3.54e-01 | 78.4% | 39.2% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.60 | 47.0 | 3.84e-01 | 96.1% | 64.6% |
| 2jgdB02 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.59 | 51.0 | 3.11e-01 | 98.0% | 40.2% |
| 1r71A01 | 1.10.10.730 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain | 0.59 | 45.0 | 4.46e-01 | 96.1% | 82.1% |
| 4cpgA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.59 | 42.0 | 3.94e-01 | 80.4% | 58.0% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.59 | 40.0 | 3.88e-01 | 72.5% | 63.9% |
| 4a64A01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 46.0 | 3.67e-01 | 100.0% | 57.6% |
| 1cpcA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.58 | 47.0 | 3.46e-01 | 98.0% | 71.0% |
| 4ga4A01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.58 | 46.0 | 4.36e-01 | 98.0% | 73.1% |
| 1qd1B02 | 3.30.70.670 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Formiminotransferase, C-terminal subdomain | 0.58 | 50.0 | 3.65e-01 | 100.0% | 52.4% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.58 | 47.0 | 3.70e-01 | 100.0% | 66.7% |
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 43.0 | 4.35e-01 | 100.0% | 94.0% |
| 1ailA00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.55 | 40.0 | 3.68e-01 | 80.4% | 57.1% |
| 1vfrA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 43.0 | 2.97e-01 | 98.0% | 41.5% |
| 3ddeB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.54 | 44.0 | 2.98e-01 | 100.0% | 58.9% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 10060 | 2007.5.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › SASA | 0.94 | 66.0 | 3.95e-01 | 72.5% | 13.1% |
| 3961786 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.94 | 87.0 | 5.66e-01 | 98.0% | 89.7% |
| 4992555 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.93 | 81.0 | 5.43e-01 | 92.2% | 28.5% |
| 4137468 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.93 | 85.0 | 5.55e-01 | 98.0% | 89.7% |
| 5078718 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.92 | 80.0 | 5.33e-01 | 94.1% | 27.0% |
| 3742303 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.92 | 85.0 | 5.52e-01 | 100.0% | 90.2% |
| 5029985 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.91 | 75.0 | 5.13e-01 | 88.2% | 28.1% |
| 5050753 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.91 | 75.0 | 5.27e-01 | 88.2% | 32.1% |
| 3200626 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.90 | 85.0 | 5.44e-01 | 100.0% | 88.0% |
| 4828003 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.90 | 83.0 | 6.10e-01 | 100.0% | 80.2% |
| 3282441 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.90 | 61.0 | 4.11e-01 | 70.6% | 76.9% |
| 3395281 | 109.4.1.342 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SBF2 | 0.89 | 80.0 | 5.15e-01 | 100.0% | 23.8% |
| 1036846 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.87 | 78.0 | 5.77e-01 | 98.0% | 78.3% |
| 4071991 | 310.2.1.1 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF | 0.86 | 79.0 | 5.23e-01 | 100.0% | 89.7% |
| 5055565 | 192.15.1.224 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › SHOCT | 0.85 | 63.0 | 4.57e-01 | 78.4% | 30.8% |
| 5066143 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.85 | 61.0 | 5.33e-01 | 76.5% | 52.0% |
| 5021741 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.84 | 73.0 | 6.50e-01 | 96.1% | 68.6% |
| 4524825 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.84 | 75.0 | 6.06e-01 | 100.0% | 71.6% |
| 4995305 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.83 | 72.0 | 5.76e-01 | 94.1% | 82.1% |
| 4358621 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.83 | 75.0 | 6.45e-01 | 100.0% | 75.9% |
| 3511354 | 4146.1.1.0 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like | 0.83 | 59.0 | 6.54e-01 | 74.5% | 95.0% |
| 5043437 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.83 | 61.0 | 4.74e-01 | 78.4% | 38.1% |
| 4646569 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.83 | 72.0 | 5.90e-01 | 100.0% | 74.7% |
| 3741472 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.83 | 61.0 | 4.42e-01 | 78.4% | 30.8% |
| 3268365 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.82 | 62.0 | 4.20e-01 | 80.4% | 24.7% |
| 4969326 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.82 | 68.0 | 4.73e-01 | 94.1% | 29.1% |
| 5054079 | 192.4.1.0 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) | 0.82 | 60.0 | 5.13e-01 | 78.4% | 50.0% |
| 3374816 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.81 | 62.0 | 4.08e-01 | 80.4% | 22.7% |
| 4999606 | 2006.1.4.50 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › DUF3368 | 0.81 | 67.0 | 4.97e-01 | 96.1% | 36.8% |
| 3735404 | 192.15.1.3 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Vps23_core | 0.81 | 61.0 | 4.17e-01 | 80.4% | 25.5% |
| 4036632 | 192.15.1.47 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GvpK | 0.81 | 60.0 | 4.79e-01 | 78.4% | 42.1% |
| 4967342 | 375.1.9.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase | 0.81 | 60.0 | 4.97e-01 | 78.4% | 47.1% |
| 4927448 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.81 | 70.0 | 6.00e-01 | 96.1% | 93.8% |
| 4220406 | 375.1.9.14 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Zinc-nucleated domain of serine integrase › GvpG | 0.81 | 59.0 | 5.37e-01 | 78.4% | 58.8% |
| 5045646 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 59.0 | 4.22e-01 | 78.4% | 28.0% |
| 4971500 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.79 | 60.0 | 4.45e-01 | 80.4% | 35.0% |
| 3628378 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.79 | 59.0 | 4.06e-01 | 80.4% | 25.5% |
| 5045248 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.79 | 58.0 | 4.84e-01 | 78.4% | 47.1% |
| 5035234 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 70.0 | 6.07e-01 | 96.1% | 80.0% |
| 4956162 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.78 | 67.0 | 5.79e-01 | 92.2% | 89.3% |
| 4325354 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.78 | 69.0 | 4.50e-01 | 100.0% | 36.4% |
| 5075780 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.78 | 59.0 | 4.24e-01 | 80.4% | 31.1% |
| 3505626 | 186.2.1.1 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain › VEFS-Box | 0.78 | 67.0 | 5.44e-01 | 96.1% | 56.8% |
| 3783353 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.78 | 71.0 | 4.32e-01 | 100.0% | 48.3% |
| 4008053 | 4168.1.1.7 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain › PF26769 | 0.78 | 56.0 | 3.85e-01 | 76.5% | 24.2% |
| 4934254 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.77 | 67.0 | 4.78e-01 | 94.1% | 48.9% |
| 5080738 | 192.15.1.47 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › GvpK | 0.77 | 56.0 | 4.74e-01 | 78.4% | 47.1% |
| 4998925 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.77 | 56.0 | 4.74e-01 | 78.4% | 47.1% |
| 4033902 | 4146.1.1.1 ↗ | alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › YqgQ-like | 0.77 | 67.0 | 6.38e-01 | 96.1% | 91.7% |
| 4289855 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.76 | 65.0 | 6.08e-01 | 100.0% | 93.8% |
| 5018283 | 633.10.1.0 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like | 0.76 | 66.0 | 5.36e-01 | 100.0% | 61.0% |
| 3791357 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.75 | 55.0 | 3.82e-01 | 82.4% | 24.2% |
| 3533245 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.75 | 55.0 | 3.84e-01 | 78.4% | 25.6% |
| 3915663 | 632.22.1.9 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › Ciart | 0.75 | 56.0 | 4.83e-01 | 80.4% | 52.6% |
| 5029911 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.75 | 65.0 | 6.27e-01 | 100.0% | 94.9% |
| 4937162 | 182.1.1.1 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain › FAD_binding_7 | 0.74 | 63.0 | 3.93e-01 | 100.0% | 24.6% |
| 3219669 | 548.1.1.1 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP | 0.74 | 60.0 | 6.09e-01 | 94.1% | 92.0% |
| 3759775 | 192.15.1.2 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Mod_r | 0.74 | 53.0 | 3.72e-01 | 78.4% | 24.8% |
| 5072863 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.73 | 63.0 | 4.32e-01 | 100.0% | 89.2% |
| 4983539 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.73 | 65.0 | 4.10e-01 | 100.0% | 74.6% |
| 5047547 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.73 | 61.0 | 4.85e-01 | 100.0% | 73.0% |
| 5064030 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.73 | 60.0 | 5.03e-01 | 100.0% | 52.6% |
| 3276289 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.72 | 52.0 | 3.35e-01 | 76.5% | 17.3% |
| 3956116 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.72 | 63.0 | 4.66e-01 | 96.1% | 51.2% |
| 3727 | 601.5.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein › Colicin_immun | 0.71 | 64.0 | 5.33e-01 | 100.0% | 83.9% |
| 3477799 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.71 | 59.0 | 5.24e-01 | 96.1% | 64.1% |
| 4536901 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.71 | 59.0 | 4.12e-01 | 94.1% | 28.8% |
| 54476 | 601.5.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Colicin D immunity protein › Colicin D immunity protein | 0.71 | 63.0 | 5.34e-01 | 100.0% | 85.9% |
| 2849677 | 129.1.1.10 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Mannitol_dh_C | 0.70 | 60.0 | 4.20e-01 | 100.0% | 92.1% |
| 3189353 | 548.1.1.1 ↗ | alpha duplicates or obligate multimers › GRIP domain › GRIP domain › GRIP domain › GRIP | 0.69 | 57.0 | 5.76e-01 | 94.1% | 92.0% |
| 4933535 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.69 | 57.0 | 3.98e-01 | 100.0% | 27.4% |
| 4259224 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.68 | 50.0 | 3.55e-01 | 78.4% | 27.7% |
| 4958364 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 54.0 | 4.48e-01 | 96.1% | 50.5% |
| 3522359 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.66 | 57.0 | 5.56e-01 | 98.0% | 87.3% |
| 5044345 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 50.0 | 4.30e-01 | 84.3% | 65.0% |
| 3216082 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.64 | 56.0 | 4.34e-01 | 100.0% | 66.1% |
| 3256661 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 51.0 | 3.77e-01 | 100.0% | 32.7% |
| 3730705 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 43.0 | 4.40e-01 | 100.0% | 86.0% |
| 3785102 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 45.0 | 2.85e-01 | 100.0% | 41.0% |