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IMGVR_UViG_3300022753_002108-3300022753-Ga0216341_1002091116
Arc-VirIMGVR_UViG_3300022753_002108-3300022753-Ga0216341_1002091116
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-42_135-172
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ul4A01 | 4.10.1100.10 | Few Secondary Structures › Irregular › DNA-binding domain of squamosa promoter binding protein-like 12 (lacking the second zinc- binding site) › Transcription factor, SBP-box domain | 0.57 | 25.0 | 2.78e-01 | 95.0% | 47.7% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 33.0 | 3.79e-01 | 88.7% | 86.0% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.54 | 25.0 | 3.16e-01 | 87.5% | 71.7% |
| 2jo6A00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.53 | 36.0 | 3.33e-01 | 100.0% | 51.8% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957888 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.65 | 27.0 | 3.09e-01 | 87.5% | 51.7% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.62 | 29.0 | 3.41e-01 | 97.5% | 60.0% |
| 3238793 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.60 | 32.0 | 3.88e-01 | 97.5% | 82.0% |
| 3540537 | 376.1.3.26 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DCR | 0.60 | 35.0 | 3.62e-01 | 93.8% | 61.3% |
| 4136157 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.57 | 29.0 | 3.12e-01 | 93.8% | 54.3% |
| 3521805 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 27.0 | 2.81e-01 | 87.5% | 50.7% |
| 4942956 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.54 | 26.0 | 3.15e-01 | 100.0% | 66.0% |
| 2841823 | 4.1.1.114 ↗ | beta barrels › SH3 › SH3 › SH3 › PSA_CBD | 0.54 | 27.0 | 3.04e-01 | 100.0% | 58.9% |
| 3600498 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 43.0 | 2.83e-01 | 87.5% | 42.8% |
| 3417528 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 41.0 | 2.82e-01 | 87.5% | 43.1% |
D2
medium
residues 43-134
Domain cluster:
rep: IMGVR_UViG_3300026311_000663-3300026311-Ga0209723_10013027__D58-160