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IMGVR_UViG_3300022855_000154-3300022855-Ga0222677_100027632

Arc-Vir

IMGVR_UViG_3300022855_000154-3300022855-Ga0222677_100027632

Quality

54.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 145-314
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF27237.1 best AF_1625_C 36.6 5.40e-09 92.3% 79.4%
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.78 45.0 5.69e-01 100.0% 95.1%
1gwmA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.77 58.0 6.07e-01 99.4% 85.6%
1wcuA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.76 59.0 6.29e-01 99.4% 91.3%
8hhvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.76 53.0 6.22e-01 88.2% 100.0%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 53.0 5.82e-01 100.0% 91.3%
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.73 54.0 6.13e-01 98.2% 100.0%
6tfjA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 48.0 5.76e-01 88.2% 100.0%
1wkyA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 58.0 6.30e-01 98.2% 100.0%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.72 54.0 6.04e-01 98.2% 100.0%
2w3jA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.71 53.0 5.79e-01 98.8% 94.9%
4xuoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 60.0 6.25e-01 100.0% 97.4%
2bgoA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 48.0 5.62e-01 98.8% 100.0%
6a48A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 58.0 6.17e-01 98.2% 100.0%
1tvgA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 53.0 5.91e-01 98.2% 98.5%
5fuiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 50.0 5.74e-01 99.4% 100.0%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.70 57.0 6.07e-01 99.4% 98.0%
5lz6A00 2.60.120.680 Mainly Beta › Sandwich › Jelly Rolls › GOLD domain 0.70 44.0 4.96e-01 97.1% 83.3%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 60.0 6.15e-01 99.4% 97.6%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 49.0 5.61e-01 98.2% 100.0%
2c4xA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 58.0 6.08e-01 98.2% 99.4%
1cx1A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.68 55.0 5.73e-01 99.4% 94.8%
4qawH03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 50.0 5.55e-01 100.0% 97.8%
6a48A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 54.0 5.83e-01 96.5% 100.0%
1od3A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 48.0 5.37e-01 99.4% 95.4%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 60.0 6.16e-01 98.8% 100.0%
1guiA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.67 57.0 6.00e-01 98.2% 100.0%
2q7nA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 37.0 4.46e-01 98.8% 82.7%
4d0qA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 59.0 6.03e-01 100.0% 98.8%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.65 55.0 5.57e-01 98.8% 89.8%
5f7uA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 47.0 5.37e-01 98.2% 100.0%
6ovbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 50.0 5.20e-01 100.0% 88.3%
1pmhX00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 60.0 5.85e-01 100.0% 97.8%
4indA01 2.60.120.1320 Mainly Beta › Sandwich › Jelly Rolls › 0.65 48.0 5.14e-01 99.4% 89.0%
1rj8A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.65 49.0 5.37e-01 100.0% 95.0%
4oq8A00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.64 45.0 4.82e-01 100.0% 84.0%
5l73A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 57.0 5.67e-01 99.4% 93.7%
4hsqA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 46.0 4.93e-01 91.8% 86.8%
2ypjA00 2.60.120.1070 Mainly Beta › Sandwich › Jelly Rolls › 0.64 44.0 5.12e-01 97.1% 98.4%
2w91A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 58.0 5.70e-01 99.4% 97.8%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 47.0 5.21e-01 97.1% 96.3%
1k42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 58.0 5.86e-01 99.4% 99.4%
4h3wA01 2.60.290.20 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › Protein of unknown function (DUF4621), C-terminal domain 0.63 45.0 5.19e-01 86.5% 100.0%
2zxqA05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.63 58.0 5.53e-01 100.0% 94.9%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.63 36.0 4.40e-01 70.0% 88.7%
6xofA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.63 57.0 5.03e-01 100.0% 94.9%
1olrA00 2.60.120.180 Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain 0.63 55.0 4.99e-01 93.5% 95.5%
4bq2D01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.62 57.0 5.53e-01 98.2% 96.3%
3cu7A10 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.62 40.0 4.72e-01 100.0% 94.8%
3qdhA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 45.0 4.72e-01 98.2% 81.4%
1o91A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.62 45.0 5.09e-01 100.0% 97.7%
3obaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.62 57.0 5.34e-01 100.0% 86.3%
1ji6A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 53.0 5.49e-01 99.4% 98.1%
5z6pA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.61 56.0 5.55e-01 98.2% 96.1%
5vqfD01 2.60.120.970 Mainly Beta › Sandwich › Jelly Rolls › 0.61 50.0 4.58e-01 100.0% 65.5%
2vtfA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 56.0 5.60e-01 99.4% 98.3%
6etzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 56.0 5.29e-01 100.0% 82.9%
1lnsA04 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 55.0 5.36e-01 100.0% 89.2%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 36.0 4.15e-01 86.5% 82.4%
2je8A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 55.0 5.27e-01 100.0% 98.4%
4d8mA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 53.0 5.33e-01 100.0% 98.2%
4fixA01 3.90.550.60 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › 0.57 53.0 4.00e-01 100.0% 66.7%
4b96A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.57 45.0 4.72e-01 98.8% 92.7%
6sl4A00 2.60.40.710 Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like 0.57 45.0 4.75e-01 99.4% 94.0%
4igbB02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 41.0 4.45e-01 90.6% 88.8%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 37.0 4.34e-01 77.1% 95.8%
5fq0A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 32.0 3.85e-01 96.5% 86.4%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.54 44.0 4.73e-01 98.2% 100.0%
4qmaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 34.0 3.70e-01 85.9% 74.1%
5u55A02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 35.0 3.96e-01 93.5% 90.2%
7zvmA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 32.0 3.92e-01 95.3% 100.0%
4lejA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 36.0 3.65e-01 91.2% 70.4%
1sefA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 32.0 3.55e-01 91.2% 76.3%
4irzA02 2.60.40.1460 Mainly Beta › Sandwich › Immunoglobulin-like › Integrin domains. Chain A, domain 2 0.51 36.0 3.73e-01 100.0% 76.1%
1b35C00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.51 47.0 3.96e-01 100.0% 67.0%
1lr5B00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 34.0 3.56e-01 93.5% 73.6%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 34.0 3.84e-01 94.7% 94.2%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044440 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.84 60.0 7.00e-01 100.0% 99.2%
5008219 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 46.0 6.05e-01 83.5% 100.0%
5031167 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.79 69.0 7.22e-01 100.0% 99.4%
5077191 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.77 46.0 5.77e-01 98.8% 99.0%
5020148 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 66.0 6.84e-01 99.4% 100.0%
4943023 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 51.0 5.81e-01 95.3% 91.5%
5031168 10.1.2.190 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › GH114_assoc 0.74 61.0 6.47e-01 92.9% 97.3%
3996582 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.73 53.0 5.89e-01 100.0% 92.6%
3503404 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.73 45.0 5.48e-01 95.3% 96.3%
3849644 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.73 53.0 5.86e-01 100.0% 93.3%
3796384 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.72 44.0 5.04e-01 100.0% 81.6%
1174 10.32.1.70 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Mann_GBD_bact 0.72 58.0 6.30e-01 98.2% 100.0%
5051219 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.72 52.0 5.95e-01 100.0% 97.7%
4960572 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.72 62.0 6.34e-01 100.0% 93.9%
4102071 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.71 60.0 6.35e-01 99.4% 100.0%
3738766 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.71 53.0 5.73e-01 100.0% 90.3%
3227152 10.4.1.19 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › Glycoprotein 0.71 43.0 5.09e-01 99.4% 88.7%
5035593 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 44.0 5.41e-01 71.2% 100.0%
2884908 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 58.0 5.70e-01 99.4% 80.8%
4304353 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.70 60.0 6.23e-01 100.0% 98.1%
3930018 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.70 60.0 6.25e-01 99.4% 98.7%
4477578 10.32.1.18 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.70 55.0 5.80e-01 100.0% 92.7%
4942547 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.70 60.0 5.83e-01 100.0% 82.6%
3408524 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.70 44.0 5.08e-01 96.5% 88.3%
5027316 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.69 60.0 6.24e-01 99.4% 99.4%
3215895 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.69 53.0 5.83e-01 98.8% 97.9%
3781122 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.69 55.0 5.40e-01 100.0% 78.3%
3360768 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 42.0 4.87e-01 97.6% 84.0%
5080000 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.68 54.0 5.85e-01 94.1% 98.6%
3303696 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.68 43.0 4.76e-01 100.0% 77.9%
4961993 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.67 53.0 5.81e-01 95.9% 100.0%
3543118 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.67 58.0 5.94e-01 98.2% 97.5%
3270012 10.32.1.18 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.67 51.0 5.52e-01 100.0% 95.1%
1143 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.67 57.0 6.00e-01 98.2% 100.0%
4509186 10.32.1.8 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.66 60.0 6.03e-01 100.0% 96.5%
4301595 10.32.1.34 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Lyase_N 0.66 54.0 5.40e-01 99.4% 84.0%
3746613 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.66 59.0 5.98e-01 99.4% 96.5%
1063834 10.32.1.12 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_6 0.66 48.0 5.40e-01 98.2% 100.0%
3251299 10.32.1.18 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.66 50.0 5.36e-01 100.0% 93.0%
3837684 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.66 61.0 5.40e-01 100.0% 97.9%
3538214 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 58.0 4.46e-01 98.8% 42.3%
4022138 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 58.0 5.57e-01 100.0% 83.6%
3849254 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.65 42.0 5.10e-01 96.5% 100.0%
3525475 10.32.1.207 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ELAPOR1-like_3rd 0.65 56.0 5.84e-01 100.0% 100.0%
3946603 10.32.1.27 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › 7TMR-DISMED2 0.65 52.0 5.54e-01 96.5% 97.2%
4098247 10.32.1.55 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glft2_N 0.65 53.0 5.48e-01 99.4% 91.9%
3538225 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.64 57.0 5.83e-01 100.0% 98.8%
3917302 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.64 56.0 5.67e-01 98.2% 93.5%
4468809 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.64 56.0 5.69e-01 98.8% 94.1%
3586331 10.1.1.10 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › MAM 0.64 58.0 5.14e-01 100.0% 84.4%
3998968 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.64 49.0 5.31e-01 100.0% 94.5%
3239399 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.64 54.0 5.61e-01 99.4% 95.6%
3795887 10.32.1.216 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM 0.64 58.0 5.05e-01 100.0% 81.9%
4048590 10.32.1.53 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GalBD_like 0.63 58.0 5.78e-01 100.0% 96.0%
3266044 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 59.0 4.72e-01 100.0% 95.1%
1147770 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 58.0 5.70e-01 99.4% 97.8%
3260404 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.63 57.0 5.76e-01 99.4% 97.1%
1098409 10.32.1.167 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Agarase_CBM 0.63 58.0 5.46e-01 99.4% 96.0%
4419656 10.32.1.14 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_11 0.62 57.0 5.59e-01 100.0% 98.9%
3342496 207.1.1.119 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 0.62 41.0 2.86e-01 71.8% 21.1%
4115981 10.32.1.14 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_11 0.62 56.0 5.66e-01 97.6% 99.4%
5029875 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 57.0 5.57e-01 99.4% 99.5%
2429645 10.32.1.167 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Agarase_CBM 0.61 56.0 5.54e-01 99.4% 95.6%
866419 10.32.1.59 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM65_1 0.61 45.0 5.05e-01 100.0% 100.0%
4955985 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 52.0 4.98e-01 100.0% 81.0%
4949657 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.59 39.0 4.46e-01 89.4% 89.6%
4874174 10.2.1.5 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide 0.59 50.0 4.56e-01 100.0% 68.1%
3400156 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.58 35.0 4.36e-01 94.1% 100.0%
3715774 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 49.0 5.14e-01 99.4% 98.7%
3231401 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.57 39.0 4.23e-01 92.4% 82.8%
3532030 10.32.1.222 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_ATRN 0.56 45.0 4.65e-01 86.5% 87.9%
3231372 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.56 40.0 4.47e-01 100.0% 95.4%
3598842 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.55 45.0 4.80e-01 95.9% 98.7%
2625944 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.55 37.0 3.85e-01 95.3% 71.2%
3834078 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.55 36.0 3.51e-01 91.2% 58.5%
135733 10.40.1.1 beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR 0.54 44.0 4.73e-01 98.2% 100.0%
3367533 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.54 36.0 3.47e-01 90.6% 57.5%
5029096 10.12.1.100 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Polysacc_synt_C 0.53 35.0 3.84e-01 95.3% 82.2%
1543187 11.1.1.112 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_1 0.53 36.0 3.76e-01 100.0% 73.3%
5058198 10.12.1.3 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.53 33.0 3.76e-01 90.0% 84.0%
D2 high residues 622-648_683-724
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 43.0 3.17e-01 87.0% 23.2%
5aa5E00 1.10.645.10 Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B 0.73 48.0 2.81e-01 100.0% 8.4%
2oarB00 1.10.1200.120 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Large-conductance mechanosensitive channel, MscL; domain 1 0.72 46.0 3.70e-01 84.1% 36.0%
1qviA01 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.71 49.0 4.02e-01 71.0% 72.2%
1wp1B01 1.20.1600.10 Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.69 55.0 3.43e-01 84.1% 34.0%
3pf7B00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.65 52.0 3.14e-01 85.5% 32.8%
6xw5A01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.65 43.0 3.18e-01 75.4% 27.2%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.64 34.0 3.23e-01 81.2% 40.7%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.61 34.0 3.18e-01 85.5% 43.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 3.76e-01 88.4% 50.0%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 53.0 4.44e-01 98.6% 87.7%
2uvaG01 1.20.1050.120 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.58 34.0 2.74e-01 87.0% 28.7%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.58 35.0 3.13e-01 75.4% 43.2%
2xzmG00 1.10.455.10 Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 0.57 36.0 2.66e-01 89.9% 22.4%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 46.0 4.00e-01 89.9% 70.5%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.55 42.0 2.92e-01 89.9% 77.8%
1mhyD00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.54 50.0 2.92e-01 100.0% 23.7%
6gpxB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.54 49.0 3.26e-01 100.0% 51.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.52e-01 89.9% 63.8%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.79e-01 92.8% 82.1%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.36e-01 91.3% 65.2%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.29e-01 79.7% 78.1%
6k8nA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 31.0 2.37e-01 76.8% 26.6%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5023652 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 50.0 3.55e-01 100.0% 23.2%
3802871 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.75 47.0 4.05e-01 100.0% 41.9%
3600149 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.74 39.0 3.42e-01 85.5% 36.0%
3593736 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.72 47.0 4.07e-01 75.4% 46.0%
4453177 4207.1.2.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med7 0.71 50.0 3.98e-01 72.5% 80.0%
3482807 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.69 37.0 3.18e-01 87.0% 33.3%
3444472 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 29.0 3.07e-01 78.3% 40.0%
3220364 6166.1.1.1 alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.69 48.0 3.40e-01 98.6% 25.0%
3605428 150.1.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.68 51.0 3.48e-01 84.1% 24.0%
3749051 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.67 59.0 3.97e-01 97.1% 65.8%
3920672 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.67 47.0 4.25e-01 72.5% 68.9%
5039582 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 51.0 4.45e-01 85.5% 83.8%
5057549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 55.0 4.52e-01 91.3% 60.2%
3684015 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.64 48.0 4.17e-01 78.3% 56.0%
3799597 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.64 46.0 4.21e-01 73.9% 68.2%
2623930 4001.1.1.4 a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB 0.64 29.0 2.44e-01 79.7% 24.3%
3898373 5001.1.1.3 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_2 0.63 56.0 3.74e-01 100.0% 52.7%
3259742 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 44.0 4.26e-01 73.9% 66.7%
5001284 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 53.0 3.96e-01 91.3% 100.0%
None 0.62 30.0 2.25e-01 75.4% 20.0%
4456198 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 55.0 4.03e-01 100.0% 64.9%
3415024 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.61 51.0 3.34e-01 94.2% 57.8%
3642597 109.4.1.498 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 0.59 48.0 2.80e-01 85.5% 27.8%
5077851 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.59 51.0 3.92e-01 94.2% 97.3%
5073431 1075.1.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.59 54.0 3.17e-01 100.0% 41.0%
3991544 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.59 47.0 4.15e-01 100.0% 60.0%
4442629 3563.1.1.1 alpha bundles › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › Twin arginine protein translocation system component TatC › TatC 0.58 52.0 3.53e-01 100.0% 79.1%
3599321 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.58 46.0 3.43e-01 88.4% 53.6%
3181300 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 50.0 3.97e-01 95.7% 79.3%
5052081 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 48.0 3.65e-01 100.0% 38.8%
4946524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.18e-01 94.2% 64.5%
3169644 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.57 48.0 3.66e-01 92.8% 53.8%
5040376 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.57 47.0 4.00e-01 91.3% 79.1%
3548326 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 43.0 2.59e-01 82.6% 70.9%
3586391 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.55 49.0 3.20e-01 100.0% 26.5%
4001237 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 37.0 3.96e-01 72.5% 83.3%
2640297 808.1.1.1 a+b duplicates or obligate multimers › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › CoV_nucleocap 0.54 28.0 2.39e-01 81.2% 26.7%
3679206 2484.1.1.1 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.54 45.0 2.80e-01 94.2% 44.9%
3921728 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.53 47.0 4.00e-01 100.0% 62.6%
2409292 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 39.0 3.38e-01 94.2% 52.9%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 36.0 3.46e-01 75.4% 96.4%
4978596 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.52 45.0 3.76e-01 100.0% 58.4%
5066982 5081.1.1.1 alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.51 41.0 3.27e-01 88.4% 72.9%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.51 36.0 3.19e-01 75.4% 70.5%
4329890 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.50 46.0 3.54e-01 100.0% 70.0%
5077254 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.50 40.0 2.49e-01 92.8% 85.2%