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IMGVR_UViG_3300022868_000032-3300022868-Ga0222697_100008425
Arc-VirIMGVR_UViG_3300022868_000032-3300022868-Ga0222697_100008425
Identity
- Kingdom:
- archaea
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 244-331
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.67 | 46.0 | 4.23e-01 | 70.5% | 96.5% |
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.63 | 47.0 | 3.93e-01 | 80.7% | 71.2% |
| 2ddhA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.63 | 45.0 | 4.15e-01 | 76.1% | 78.0% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.61 | 45.0 | 4.50e-01 | 80.7% | 92.6% |
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.61 | 44.0 | 3.68e-01 | 76.1% | 72.9% |
| 3cf6E03 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.60 | 41.0 | 3.67e-01 | 71.6% | 66.4% |
| 2hmcA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.59 | 49.0 | 3.46e-01 | 96.6% | 82.5% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.58 | 39.0 | 4.12e-01 | 70.5% | 84.6% |
| 3vwaA03 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 39.0 | 2.72e-01 | 71.6% | 36.9% |
| 6hxpA01 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.55 | 34.0 | 3.27e-01 | 93.2% | 53.5% |
| 2bmuB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.51 | 43.0 | 3.29e-01 | 97.7% | 91.6% |
| 3tahA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 38.0 | 3.81e-01 | 83.0% | 79.5% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028132 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.71 | 57.0 | 5.89e-01 | 86.4% | 100.0% |
| 3966820 | 131.1.1.13 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD_5 | 0.60 | 43.0 | 3.25e-01 | 76.1% | 38.3% |
| 4266587 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.59 | 44.0 | 4.38e-01 | 81.8% | 91.6% |
| 3618803 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 34.0 | 3.98e-01 | 86.4% | 95.0% |
| 3924719 | 371.1.1.0 ↗ | few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 | 0.52 | 39.0 | 3.85e-01 | 100.0% | 73.7% |
| 4931444 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.51 | 42.0 | 3.16e-01 | 93.2% | 63.1% |
| 3611172 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.51 | 35.0 | 3.27e-01 | 71.6% | 93.6% |
D2
high
residues 340-424
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rr1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.62 | 42.0 | 3.06e-01 | 83.5% | 24.9% |
| 3ea0A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 37.0 | 2.76e-01 | 78.8% | 24.2% |
| 1lp8A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.56 | 41.0 | 3.27e-01 | 77.6% | 98.9% |
| 1llnA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.54 | 39.0 | 3.16e-01 | 76.5% | 99.4% |
| 3pvsA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 37.0 | 3.85e-01 | 74.1% | 85.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4562321 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.67 | 39.0 | 4.44e-01 | 72.9% | 80.0% |
| 3485370 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.57 | 44.0 | 2.93e-01 | 84.7% | 89.0% |
| 3464814 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.56 | 42.0 | 3.01e-01 | 81.2% | 94.5% |
| 4877200 | 152.1.1.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RPB6 › RNA_pol_Rpb6 | 0.55 | 37.0 | 3.48e-01 | 70.6% | 83.5% |
| 2515282 | 4095.1.1.0 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain | 0.53 | 43.0 | 3.69e-01 | 100.0% | 53.9% |
| 4315437 | 2484.1.1.97 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas9_RuvC | 0.53 | 41.0 | 2.89e-01 | 85.9% | 43.7% |
| 3956010 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.52 | 37.0 | 2.36e-01 | 74.1% | 67.8% |
| 4022116 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.52 | 45.0 | 3.26e-01 | 100.0% | 71.7% |
| 4975172 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 35.0 | 3.49e-01 | 78.8% | 68.9% |
| 3958199 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.50 | 41.0 | 2.94e-01 | 94.1% | 41.7% |
D3
medium
residues 1-73
Domain cluster:
representative
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1auvA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.73 | 50.0 | 5.50e-01 | 84.9% | 86.7% |
| 5l6gA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.69 | 48.0 | 3.41e-01 | 74.0% | 41.9% |
| 3orqA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.66 | 47.0 | 5.00e-01 | 84.9% | 87.3% |
| 2pvpA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.66 | 47.0 | 4.97e-01 | 84.9% | 87.5% |
| 4zfjD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 55.0 | 3.99e-01 | 100.0% | 52.9% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 48.0 | 3.60e-01 | 83.6% | 43.5% |
| 1cbfA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.62 | 49.0 | 4.19e-01 | 87.7% | 53.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.61 | 44.0 | 3.39e-01 | 76.7% | 90.4% |
| 3glkA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.61 | 44.0 | 4.67e-01 | 86.3% | 96.6% |
| 2odpA03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 43.0 | 3.38e-01 | 76.7% | 54.5% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 43.0 | 3.77e-01 | 76.7% | 62.3% |
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 47.0 | 3.65e-01 | 84.9% | 47.5% |
| 2zvbA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 49.0 | 4.17e-01 | 100.0% | 53.9% |
| 3nutB02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 49.0 | 4.21e-01 | 100.0% | 54.7% |
| 3ndcA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.60 | 47.0 | 4.06e-01 | 100.0% | 52.8% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 43.0 | 3.97e-01 | 76.7% | 91.5% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 45.0 | 4.50e-01 | 84.9% | 87.0% |
| 3ffyA00 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.58 | 44.0 | 3.89e-01 | 100.0% | 54.5% |
| 3nd1A02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.58 | 42.0 | 3.77e-01 | 79.5% | 72.7% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 45.0 | 4.01e-01 | 84.9% | 84.0% |
| 4kncA02 | 2.60.120.1380 | Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module | 0.58 | 44.0 | 3.81e-01 | 83.6% | 86.3% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 44.0 | 3.54e-01 | 83.6% | 74.1% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.57 | 51.0 | 4.20e-01 | 100.0% | 78.9% |
| 4issA03 | 3.10.490.10 | Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like | 0.57 | 40.0 | 3.26e-01 | 72.6% | 68.6% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 46.0 | 3.81e-01 | 89.0% | 53.8% |
| 3i4tA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.56 | 45.0 | 3.72e-01 | 91.8% | 49.3% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.56 | 44.0 | 3.91e-01 | 87.7% | 72.1% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 44.0 | 3.77e-01 | 87.7% | 57.3% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 42.0 | 4.23e-01 | 83.6% | 82.7% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 3.49e-01 | 83.6% | 88.1% |
| 3rwnB00 | 2.60.120.1120 | Mainly Beta › Sandwich › Jelly Rolls › Sf6-type phage tail needle knob | 0.55 | 43.0 | 3.41e-01 | 86.3% | 80.5% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 40.0 | 3.29e-01 | 80.8% | 82.4% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.54 | 46.0 | 3.65e-01 | 97.3% | 65.2% |
| 5h4eA01 | 2.60.110.10 | Mainly Beta › Sandwich › Thaumatin › Thaumatin | 0.54 | 45.0 | 3.30e-01 | 100.0% | 54.1% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 46.0 | 3.92e-01 | 97.3% | 68.0% |
| 2e8yA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 4.14e-01 | 95.9% | 75.8% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.53 | 41.0 | 3.47e-01 | 86.3% | 79.5% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 4.43e-01 | 100.0% | 83.0% |
| 7y8sB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 45.0 | 4.32e-01 | 100.0% | 83.3% |
| 2npnA02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.53 | 43.0 | 3.85e-01 | 93.2% | 73.4% |
| 3oqgA00 | 3.40.1440.50 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › | 0.53 | 41.0 | 3.12e-01 | 84.9% | 46.0% |
| 3l5hA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 4.58e-01 | 100.0% | 94.9% |
| 2iciA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 40.0 | 3.27e-01 | 84.9% | 69.1% |
| 4lplA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 39.0 | 3.16e-01 | 80.8% | 66.9% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 45.0 | 4.14e-01 | 100.0% | 84.2% |
| 1r6vA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.64e-01 | 90.4% | 71.4% |
| 1cfbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 3.98e-01 | 100.0% | 73.6% |
| 2dliA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 4.03e-01 | 100.0% | 80.6% |
| 4ydjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 3.62e-01 | 100.0% | 77.8% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.50 | 37.0 | 3.87e-01 | 79.5% | 100.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000686 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.68 | 59.0 | 4.00e-01 | 100.0% | 27.4% |
| 4097380 | 325.1.1.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › GARS_C | 0.67 | 49.0 | 3.80e-01 | 82.2% | 35.6% |
| 3705856 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.66 | 47.0 | 3.11e-01 | 75.3% | 47.7% |
| 3782814 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.66 | 56.0 | 3.80e-01 | 98.6% | 44.6% |
| 3715676 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 46.0 | 4.31e-01 | 74.0% | 63.3% |
| 3691574 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 51.0 | 5.06e-01 | 84.9% | 100.0% |
| 5078886 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.64 | 49.0 | 4.28e-01 | 83.6% | 54.5% |
| 4956474 | 284.1.1.9 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N | 0.62 | 47.0 | 4.86e-01 | 80.8% | 98.6% |
| 3886404 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.62 | 49.0 | 4.20e-01 | 89.0% | 78.4% |
| 3520955 | 2006.1.3.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DNA_gyraseB_C,Toprim | 0.62 | 44.0 | 3.02e-01 | 75.3% | 32.5% |
| 5001166 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.62 | 44.0 | 3.60e-01 | 74.0% | 47.4% |
| 3594652 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.61 | 48.0 | 3.24e-01 | 84.9% | 31.6% |
| 4486768 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.61 | 45.0 | 4.02e-01 | 100.0% | 53.6% |
| 3600564 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.61 | 39.0 | 4.04e-01 | 86.3% | 68.6% |
| 3414064 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.60 | 42.0 | 4.67e-01 | 91.8% | 100.0% |
| 3476439 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 39.0 | 3.89e-01 | 71.2% | 65.3% |
| 3283478 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 46.0 | 3.74e-01 | 89.0% | 48.0% |
| 3400735 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.58 | 41.0 | 4.49e-01 | 91.8% | 100.0% |
| 3400462 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.58 | 41.0 | 4.41e-01 | 91.8% | 94.8% |
| 3720872 | 1.1.5.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyrid_ox_like | 0.57 | 44.0 | 3.33e-01 | 84.9% | 36.8% |
| 1937720 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.57 | 43.0 | 3.76e-01 | 84.9% | 51.3% |
| 4398420 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.57 | 45.0 | 3.90e-01 | 100.0% | 54.2% |
| 5049056 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 50.0 | 3.95e-01 | 100.0% | 70.3% |
| 3883513 | 11.1.1.185 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DBB | 0.56 | 44.0 | 3.86e-01 | 84.9% | 66.4% |
| 3964762 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.56 | 43.0 | 3.71e-01 | 84.9% | 70.4% |
| 4624792 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.56 | 41.0 | 3.65e-01 | 86.3% | 51.3% |
| 3975705 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.56 | 36.0 | 4.08e-01 | 71.2% | 96.0% |
| 3901396 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 4.35e-01 | 100.0% | 79.5% |
| 3649276 | 887.1.1.0 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e | 0.55 | 40.0 | 3.51e-01 | 79.5% | 84.2% |
| 4566126 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.55 | 40.0 | 3.52e-01 | 84.9% | 49.6% |
| 3868244 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.54 | 48.0 | 4.42e-01 | 100.0% | 76.8% |
| 3528926 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 45.0 | 4.04e-01 | 93.2% | 75.2% |
| 4106367 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.54 | 37.0 | 4.04e-01 | 90.4% | 100.0% |
| 3931855 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.53 | 46.0 | 3.31e-01 | 98.6% | 57.3% |
| 5059004 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.53 | 43.0 | 3.80e-01 | 91.8% | 70.4% |
| 4086554 | 11.10.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › Sina_TRAF | 0.53 | 41.0 | 3.43e-01 | 86.3% | 80.7% |
| 1937224 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.53 | 43.0 | 3.85e-01 | 93.2% | 73.4% |
| 3924985 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.17e-01 | 100.0% | 74.7% |
| 3520066 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.90e-01 | 93.2% | 70.5% |
| 3165210 | 10.12.1.40 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 | 0.52 | 41.0 | 2.83e-01 | 89.0% | 59.0% |
| 5028185 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 45.0 | 4.37e-01 | 100.0% | 88.7% |
| 3405569 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.52 | 44.0 | 3.94e-01 | 100.0% | 82.7% |
| 4999005 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.51 | 43.0 | 3.38e-01 | 94.5% | 47.3% |
| 3923079 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 45.0 | 4.14e-01 | 100.0% | 77.9% |
| 4018289 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 42.0 | 3.53e-01 | 100.0% | 81.4% |
D4
medium
residues 74-216
Domain cluster:
rep: MN234206.1__QFG12290.1__PBI_RACECAR_277__00246__D97-238
CATH (62)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A02 | 3.30.70.1790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain | 0.81 | 57.0 | 6.67e-01 | 93.0% | 100.0% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.78 | 69.0 | 4.96e-01 | 93.7% | 75.3% |
| 1g71A01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.77 | 61.0 | 5.02e-01 | 90.2% | 49.2% |
| 2faoA01 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.77 | 72.0 | 5.63e-01 | 100.0% | 62.4% |
| 2iruA02 | 3.30.70.3300 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.76 | 64.0 | 6.55e-01 | 88.8% | 92.0% |
| 5of3A00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.75 | 64.0 | 4.87e-01 | 90.2% | 53.9% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.73 | 41.0 | 5.22e-01 | 72.0% | 92.9% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.73 | 40.0 | 5.16e-01 | 76.2% | 95.1% |
| 1z1dB00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.72 | 48.0 | 5.07e-01 | 92.3% | 74.8% |
| 5wm1A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.71 | 46.0 | 5.20e-01 | 75.5% | 86.2% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 41.0 | 5.13e-01 | 72.0% | 95.4% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.69 | 38.0 | 4.79e-01 | 72.7% | 91.5% |
| 2qv6B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.69 | 48.0 | 5.14e-01 | 74.8% | 82.8% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.68 | 40.0 | 5.07e-01 | 75.5% | 98.8% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.68 | 48.0 | 5.43e-01 | 91.6% | 99.0% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.68 | 47.0 | 5.41e-01 | 90.2% | 99.0% |
| 3onqA02 | 3.30.70.2730 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 38.0 | 4.87e-01 | 72.7% | 97.5% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.67 | 48.0 | 4.14e-01 | 73.4% | 82.9% |
| 4i68A00 | 3.30.70.1800 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 38.0 | 4.66e-01 | 90.2% | 90.0% |
| 4qbuA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.65 | 32.0 | 4.45e-01 | 74.8% | 100.0% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 47.0 | 4.77e-01 | 74.8% | 81.2% |
| 1gx5A03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 44.0 | 4.70e-01 | 86.0% | 80.3% |
| 4xeaA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.65 | 46.0 | 4.20e-01 | 73.4% | 91.7% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.65 | 55.0 | 4.66e-01 | 92.3% | 96.2% |
| 7e6gA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.64 | 46.0 | 4.62e-01 | 74.8% | 80.5% |
| 1r89A03 | 3.30.70.590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Poly(A) polymerase predicted RNA binding domain | 0.64 | 50.0 | 5.22e-01 | 90.9% | 88.8% |
| 3amiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 45.0 | 4.06e-01 | 73.4% | 91.0% |
| 4zmuA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.63 | 46.0 | 4.52e-01 | 74.8% | 73.5% |
| 4kgmA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.63 | 54.0 | 4.64e-01 | 93.7% | 92.2% |
| 3mtkA00 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.63 | 46.0 | 4.40e-01 | 74.8% | 67.5% |
| 2r7rA04 | 3.30.70.2480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 4.81e-01 | 82.5% | 82.8% |
| 2op5B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 43.0 | 4.94e-01 | 73.4% | 99.0% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 36.0 | 4.45e-01 | 72.7% | 96.3% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 42.0 | 4.91e-01 | 72.7% | 100.0% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.62 | 33.0 | 4.00e-01 | 71.3% | 80.0% |
| 3otdA00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.61 | 53.0 | 4.48e-01 | 94.4% | 92.9% |
| 2g47A04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.61 | 49.0 | 4.12e-01 | 84.6% | 91.3% |
| 1vx7X00 | 3.30.1360.210 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.61 | 39.0 | 4.61e-01 | 73.4% | 94.8% |
| 2y8yA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.61 | 36.0 | 4.47e-01 | 72.7% | 97.7% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.60 | 34.0 | 4.16e-01 | 71.3% | 89.7% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 40.0 | 4.55e-01 | 72.7% | 95.3% |
| 6ahuH01 | 3.30.70.3250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribonuclease P, Pop5 subunit | 0.58 | 38.0 | 4.47e-01 | 73.4% | 98.9% |
| 4er8A00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.58 | 48.0 | 4.67e-01 | 90.9% | 81.8% |
| 2fyxA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.58 | 45.0 | 4.68e-01 | 81.8% | 90.8% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.58 | 46.0 | 3.97e-01 | 84.6% | 87.2% |
| 5yjlB01 | 3.30.460.30 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain | 0.57 | 49.0 | 4.74e-01 | 93.7% | 85.1% |
| 4c8yA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 4.43e-01 | 76.2% | 95.2% |
| 1f3vA00 | 3.30.70.680 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TRADD, N-terminal domain | 0.57 | 48.0 | 4.63e-01 | 90.2% | 88.6% |
| 2r4fA03 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.56 | 43.0 | 4.69e-01 | 92.3% | 100.0% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 4.64e-01 | 93.7% | 95.3% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 4.23e-01 | 91.6% | 98.1% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.53 | 35.0 | 4.03e-01 | 93.0% | 97.9% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 48.0 | 4.34e-01 | 100.0% | 83.2% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.53 | 48.0 | 4.32e-01 | 100.0% | 96.9% |
| 5l6gA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.52 | 45.0 | 3.85e-01 | 93.0% | 68.6% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 32.0 | 3.80e-01 | 94.4% | 97.7% |
| 1dobA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 33.0 | 3.29e-01 | 93.7% | 59.5% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 45.0 | 4.23e-01 | 100.0% | 79.1% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 47.0 | 4.24e-01 | 100.0% | 80.0% |
| 3fotA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 35.0 | 3.00e-01 | 72.0% | 85.3% |
| 1yk9A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.50 | 46.0 | 4.21e-01 | 100.0% | 97.3% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 27.0 | 3.53e-01 | 95.8% | 97.4% |
ECOD (76)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4441734 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.85 | 70.0 | 6.33e-01 | 99.3% | 65.9% |
| 5004227 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.81 | 77.0 | 6.22e-01 | 100.0% | 58.0% |
| 5027616 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.80 | 66.0 | 5.27e-01 | 90.2% | 46.9% |
| 5011497 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.80 | 60.0 | 5.27e-01 | 95.1% | 55.0% |
| 5059790 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.79 | 74.0 | 5.24e-01 | 100.0% | 58.3% |
| 4962169 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.79 | 63.0 | 5.23e-01 | 89.5% | 50.4% |
| 4998612 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 68.0 | 5.62e-01 | 90.2% | 53.8% |
| 4554731 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.79 | 65.0 | 5.41e-01 | 89.5% | 53.0% |
| 4946875 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 66.0 | 5.27e-01 | 89.5% | 58.9% |
| 2711606 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.77 | 73.0 | 5.39e-01 | 100.0% | 52.3% |
| 5050906 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 72.0 | 5.47e-01 | 100.0% | 66.7% |
| 3518002 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 68.0 | 5.13e-01 | 93.7% | 66.4% |
| 3284431 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.77 | 72.0 | 5.48e-01 | 100.0% | 54.8% |
| 3959043 | 862.1.1.0 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain | 0.77 | 72.0 | 5.38e-01 | 100.0% | 53.5% |
| 3692641 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.77 | 68.0 | 5.31e-01 | 93.7% | 62.9% |
| 4956744 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.76 | 66.0 | 5.30e-01 | 90.2% | 62.4% |
| None | — | 0.76 | 71.0 | 5.42e-01 | 100.0% | 55.5% | |
| 4552974 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.76 | 65.0 | 5.39e-01 | 90.2% | 60.0% |
| 4426711 | 862.1.1.1 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S | 0.76 | 64.0 | 5.17e-01 | 90.2% | 49.4% |
| 4986859 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.76 | 71.0 | 5.50e-01 | 100.0% | 59.3% |
| 5000831 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.75 | 70.0 | 5.57e-01 | 100.0% | 69.5% |
| 4987159 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.75 | 67.0 | 5.42e-01 | 95.1% | 56.5% |
| 4985674 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.75 | 70.0 | 5.51e-01 | 100.0% | 68.5% |
| 5066297 | 862.1.1.5 ↗ | a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol | 0.73 | 68.0 | 5.40e-01 | 100.0% | 68.4% |
| 3619851 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 46.0 | 5.59e-01 | 72.0% | 100.0% |
| 4932448 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.71 | 44.0 | 5.41e-01 | 72.7% | 98.9% |
| 5043528 | 304.48.1.22 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GCH_III | 0.70 | 48.0 | 5.20e-01 | 74.8% | 83.3% |
| 3936869 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.70 | 45.0 | 5.31e-01 | 72.0% | 93.9% |
| 4938292 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.69 | 45.0 | 5.35e-01 | 72.7% | 97.9% |
| 3952615 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.67 | 49.0 | 4.57e-01 | 74.8% | 65.7% |
| 3392977 | 304.55.2.9 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › DUF4780 | 0.67 | 42.0 | 5.08e-01 | 74.1% | 100.0% |
| 4932798 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.66 | 57.0 | 5.34e-01 | 92.3% | 82.9% |
| 4062713 | 304.48.1.92 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › PF30234 | 0.66 | 47.0 | 4.98e-01 | 90.9% | 83.2% |
| 4518792 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.64 | 46.0 | 5.10e-01 | 72.7% | 98.2% |
| 4973231 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.64 | 54.0 | 4.59e-01 | 92.3% | 95.0% |
| 3280378 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 47.0 | 4.48e-01 | 76.2% | 66.1% |
| 3651874 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.63 | 37.0 | 4.37e-01 | 74.1% | 83.0% |
| 3987638 | 304.48.1.49 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_GdpP | 0.63 | 46.0 | 4.56e-01 | 74.8% | 73.3% |
| 4992077 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.63 | 54.0 | 4.82e-01 | 92.3% | 82.0% |
| 4987385 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.62 | 39.0 | 4.61e-01 | 70.6% | 96.7% |
| 3376015 | 304.9.1.146 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Helitron_like_N | 0.62 | 53.0 | 4.85e-01 | 91.6% | 89.4% |
| 4943374 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.62 | 41.0 | 4.79e-01 | 74.1% | 98.9% |
| 3496070 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.62 | 50.0 | 3.04e-01 | 86.0% | 68.6% |
| 4443361 | 304.55.2.7 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › tRNA_synt_2f | 0.61 | 49.0 | 4.20e-01 | 84.6% | 100.0% |
| 5011827 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.61 | 38.0 | 4.33e-01 | 72.0% | 87.0% |
| 5024461 | 304.28.1.38 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C | 0.61 | 50.0 | 4.78e-01 | 87.4% | 95.2% |
| 3709350 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.61 | 47.0 | 4.32e-01 | 80.4% | 82.2% |
| 4968297 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.61 | 37.0 | 4.49e-01 | 71.3% | 100.0% |
| 4943031 | 304.28.1.38 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C | 0.60 | 51.0 | 4.69e-01 | 90.9% | 90.3% |
| 5051424 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.60 | 40.0 | 4.65e-01 | 91.6% | 100.0% |
| 5005568 | 304.28.1.38 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › CAA_C | 0.60 | 51.0 | 4.82e-01 | 90.9% | 95.9% |
| 4552979 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.60 | 49.0 | 4.78e-01 | 87.4% | 96.2% |
| 4987404 | 304.20.1.4 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › CAA_C | 0.60 | 50.0 | 4.53e-01 | 89.5% | 86.8% |
| 3714466 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.60 | 37.0 | 4.41e-01 | 87.4% | 93.7% |
| 4941427 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.59 | 40.0 | 4.51e-01 | 80.4% | 93.3% |
| 3281659 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 38.0 | 4.42e-01 | 94.4% | 94.0% |
| 4975729 | 304.48.1.112 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › SatD | 0.59 | 43.0 | 4.42e-01 | 75.5% | 80.0% |
| None | — | 0.59 | 49.0 | 3.36e-01 | 90.2% | 73.9% | |
| 4964275 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.58 | 43.0 | 4.61e-01 | 81.1% | 90.8% |
| 3499766 | 3914.1.1.0 ↗ | alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain | 0.58 | 47.0 | 2.92e-01 | 86.0% | 71.0% |
| 4945349 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 38.0 | 4.45e-01 | 92.3% | 98.9% |
| 5026874 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.58 | 44.0 | 4.77e-01 | 86.0% | 98.3% |
| 4943122 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.57 | 39.0 | 4.44e-01 | 79.7% | 96.2% |
| 3786805 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 39.0 | 4.32e-01 | 92.3% | 90.0% |
| 4926825 | 304.4.1.2 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MIase | 0.57 | 35.0 | 3.96e-01 | 72.0% | 81.9% |
| 5031880 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.57 | 40.0 | 4.43e-01 | 80.4% | 95.4% |
| None | — | 0.55 | 46.0 | 4.57e-01 | 91.6% | 91.5% | |
| 3813645 | 304.9.1.9 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_2 | 0.54 | 46.0 | 4.11e-01 | 93.0% | 65.2% |
| 4022553 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.53 | 46.0 | 3.81e-01 | 96.5% | 61.1% |
| 5060664 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.53 | 40.0 | 4.33e-01 | 81.8% | 98.3% |
| 3957247 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.52 | 48.0 | 4.09e-01 | 100.0% | 65.7% |
| 3412446 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.52 | 47.0 | 3.87e-01 | 99.3% | 81.2% |
| 4308725 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.52 | 48.0 | 4.14e-01 | 100.0% | 72.6% |
| 3951840 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.51 | 47.0 | 3.93e-01 | 100.0% | 71.8% |
| 3934934 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.51 | 46.0 | 3.88e-01 | 100.0% | 75.1% |
| 2101440 | 244.1.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › FAD_binding_3 | 0.51 | 31.0 | 3.60e-01 | 93.7% | 87.8% |