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IMGVR_UViG_3300022888_000268-3300022888-Ga0233428_10060762
Arc-VirIMGVR_UViG_3300022888_000268-3300022888-Ga0233428_10060762
Identity
- Kingdom:
- archaea
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-76
Domain cluster:
rep: IMGVR_UViG_3300017704_000350-3300017704-Ga0181371_100016418__D3-71
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 44.0 | 2.85e-01 | 70.7% | 37.5% |
| 2hesX00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 41.0 | 2.80e-01 | 70.7% | 39.0% |
| 3p51A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 48.0 | 3.96e-01 | 89.3% | 77.2% |
| 3fe4B00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.60 | 49.0 | 3.54e-01 | 94.7% | 70.2% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.60 | 50.0 | 3.89e-01 | 94.7% | 71.3% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 50.0 | 4.65e-01 | 100.0% | 74.5% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 46.0 | 3.12e-01 | 86.7% | 92.4% |
| 2mhgA00 | 2.20.130.30 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › Protein of unknown function DUF2782 | 0.59 | 40.0 | 4.01e-01 | 76.0% | 70.7% |
| 3rbyA01 | 2.40.128.320 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain | 0.59 | 49.0 | 4.08e-01 | 100.0% | 78.0% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 49.0 | 4.19e-01 | 100.0% | 64.3% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 44.0 | 2.87e-01 | 82.7% | 46.8% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.56 | 47.0 | 4.30e-01 | 100.0% | 70.3% |
| 2af5A02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.56 | 39.0 | 3.27e-01 | 76.0% | 40.6% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.55 | 39.0 | 4.33e-01 | 98.7% | 100.0% |
| 1sjgA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.55 | 43.0 | 3.90e-01 | 90.7% | 90.2% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.54 | 37.0 | 3.53e-01 | 70.7% | 63.2% |
| 4by2B00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.54 | 43.0 | 3.39e-01 | 86.7% | 92.3% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.10e-01 | 76.0% | 39.0% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.53 | 47.0 | 4.23e-01 | 100.0% | 82.9% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 39.0 | 3.20e-01 | 78.7% | 63.5% |
| 1wlgA02 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.53 | 44.0 | 3.69e-01 | 97.3% | 93.6% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 43.0 | 3.46e-01 | 98.7% | 79.1% |
| 6cz7A01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.52 | 35.0 | 3.74e-01 | 72.0% | 85.5% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 39.0 | 2.60e-01 | 84.0% | 22.8% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.51 | 40.0 | 3.44e-01 | 86.7% | 65.9% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 31.0 | 3.30e-01 | 97.3% | 68.2% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 45.0 | 3.98e-01 | 100.0% | 82.6% |
| 3b8lA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 43.0 | 3.60e-01 | 100.0% | 64.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3583811 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.70 | 49.0 | 3.01e-01 | 73.3% | 46.9% |
| 3908192 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.67 | 54.0 | 4.93e-01 | 89.3% | 68.0% |
| 3605532 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.63 | 43.0 | 2.78e-01 | 70.7% | 21.4% |
| 4678616 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.62 | 45.0 | 2.83e-01 | 76.0% | 36.0% |
| 3614968 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.62 | 45.0 | 4.04e-01 | 76.0% | 85.7% |
| 3639435 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.62 | 44.0 | 2.67e-01 | 76.0% | 20.9% |
| 3418339 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.62 | 43.0 | 2.57e-01 | 72.0% | 31.7% |
| 3183104 | 9.4.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DUF3471 | 0.62 | 54.0 | 4.58e-01 | 100.0% | 73.1% |
| 3703246 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.61 | 44.0 | 3.90e-01 | 76.0% | 82.7% |
| 3787070 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.60 | 41.0 | 2.53e-01 | 72.0% | 18.7% |
| None | — | 0.59 | 43.0 | 2.75e-01 | 77.3% | 39.6% | |
| 3998831 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.59 | 41.0 | 2.92e-01 | 74.7% | 28.3% |
| 3935038 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.58 | 44.0 | 4.41e-01 | 84.0% | 96.2% |
| 1149046 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.58 | 45.0 | 4.08e-01 | 92.0% | 59.5% |
| 3433410 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.56 | 46.0 | 3.11e-01 | 90.7% | 87.5% |
| 3403585 | 77.3.1.6 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › PF30399 | 0.56 | 40.0 | 3.43e-01 | 76.0% | 60.0% |
| 4666231 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.56 | 49.0 | 3.79e-01 | 100.0% | 66.3% |
| 3994860 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 41.0 | 2.66e-01 | 78.7% | 29.2% |
| 3781085 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.55 | 47.0 | 3.77e-01 | 100.0% | 61.2% |
| 3421553 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.55 | 47.0 | 4.03e-01 | 97.3% | 95.2% |
| 4441857 | 3347.1.1.6 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531, TEN_YD-shell | 0.55 | 43.0 | 2.75e-01 | 86.7% | 73.6% |
| 4877157 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.55 | 48.0 | 3.20e-01 | 100.0% | 30.1% |
| 3439467 | 241.6.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits | 0.54 | 42.0 | 3.62e-01 | 88.0% | 89.2% |
| 3591681 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.53 | 42.0 | 3.77e-01 | 88.0% | 90.9% |
| 3499681 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.53 | 44.0 | 4.17e-01 | 96.0% | 89.2% |
| 3817379 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.51 | 44.0 | 2.66e-01 | 100.0% | 74.7% |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 37.0 | 3.49e-01 | 78.7% | 81.1% |