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IMGVR_UViG_3300022888_000292-3300022888-Ga0233428_10019309
Arc-VirIMGVR_UViG_3300022888_000292-3300022888-Ga0233428_10019309
Identity
- Kingdom:
- archaea
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-153
Domain cluster:
rep: IMGVR_UViG_3300025584_000284-3300025584-Ga0209774_100031726__D151-252
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r3pB00 | 3.40.960.10 | Alpha Beta › 3-Layer(aba) Sandwich › Endonuclease; Chain A › VSR Endonuclease | 0.75 | 46.0 | 5.38e-01 | 77.9% | 85.7% |
| 4qbnA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 46.0 | 5.51e-01 | 78.7% | 96.8% |
| 4qboA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.69 | 42.0 | 5.04e-01 | 77.9% | 90.2% |
| 3s1sA01 | 3.90.1570.30 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.65 | 51.0 | 4.76e-01 | 82.4% | 82.2% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.62 | 48.0 | 4.76e-01 | 82.4% | 89.7% |
| 3odhA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.60 | 43.0 | 3.84e-01 | 74.3% | 68.6% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 42.0 | 4.16e-01 | 73.5% | 75.0% |
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.58 | 41.0 | 4.31e-01 | 72.1% | 82.7% |
| 2w00A01 | 3.90.1570.50 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.57 | 44.0 | 4.03e-01 | 78.7% | 76.6% |
| 1thtA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 46.0 | 3.66e-01 | 96.3% | 98.6% |
| 1aoxA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.50 | 39.0 | 3.42e-01 | 80.9% | 86.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977249 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.80 | 55.0 | 5.60e-01 | 70.6% | 94.1% |
| 4033074 | 2008.1.1.83 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF1064 | 0.74 | 56.0 | 5.73e-01 | 77.2% | 86.8% |
| 4336609 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.72 | 49.0 | 5.21e-01 | 80.1% | 78.0% |
| 4620053 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 49.0 | 4.50e-01 | 80.1% | 55.4% |
| 4929961 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 47.0 | 5.04e-01 | 70.6% | 79.2% |
| 4995692 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.69 | 51.0 | 5.21e-01 | 80.9% | 79.2% |
| 4931670 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.68 | 52.0 | 4.15e-01 | 79.4% | 92.5% |
| 5080335 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 52.0 | 4.00e-01 | 80.9% | 54.7% |
| 3164196 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.67 | 52.0 | 4.16e-01 | 80.1% | 94.8% |
| 3976034 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.67 | 48.0 | 5.17e-01 | 75.0% | 87.0% |
| 5018509 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.66 | 51.0 | 4.07e-01 | 79.4% | 92.5% |
| 3838750 | 2008.1.1.59 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_1 | 0.66 | 49.0 | 4.87e-01 | 77.9% | 96.6% |
| 5004431 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.66 | 51.0 | 4.18e-01 | 80.9% | 91.7% |
| 5004276 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.66 | 51.0 | 4.09e-01 | 80.1% | 93.2% |
| 3965312 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.66 | 51.0 | 4.17e-01 | 81.6% | 93.5% |
| 3387257 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.66 | 51.0 | 4.20e-01 | 81.6% | 94.2% |
| 3270711 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.65 | 50.0 | 5.12e-01 | 79.4% | 84.6% |
| 4955169 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 47.0 | 5.41e-01 | 75.7% | 100.0% |
| 5073133 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.65 | 50.0 | 4.85e-01 | 80.1% | 87.3% |
| 4930109 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.65 | 51.0 | 4.10e-01 | 83.1% | 91.2% |
| 4935477 | 2008.1.1.15 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N | 0.65 | 50.0 | 4.15e-01 | 80.1% | 93.5% |
| 4959588 | 2008.1.1.100 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N_2 | 0.64 | 50.0 | 4.64e-01 | 80.1% | 73.9% |
| 4608919 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 50.0 | 4.07e-01 | 80.9% | 89.6% |
| 5014346 | 2008.1.1.114 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4143 | 0.64 | 46.0 | 5.27e-01 | 75.7% | 100.0% |
| 5014169 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 48.0 | 5.07e-01 | 81.6% | 87.8% |
| 4400584 | 192.8.1.474 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › RmuC | 0.64 | 50.0 | 3.69e-01 | 80.9% | 46.1% |
| 2715553 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.63 | 47.0 | 5.02e-01 | 77.2% | 100.0% |
| 2721398 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.63 | 48.0 | 4.94e-01 | 79.4% | 93.0% |
| 5080826 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 48.0 | 4.68e-01 | 78.7% | 80.0% |
| 5042118 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 49.0 | 4.70e-01 | 81.6% | 78.1% |
| 4964258 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 48.0 | 4.71e-01 | 79.4% | 97.2% |
| 4998161 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 49.0 | 4.73e-01 | 83.1% | 85.8% |
| 5053093 | 2008.1.1.236 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27126 | 0.62 | 48.0 | 4.45e-01 | 80.1% | 87.5% |
| 5031240 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 47.0 | 4.86e-01 | 79.4% | 93.6% |
| 4928998 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 47.0 | 4.66e-01 | 81.6% | 90.3% |
| 4107946 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 52.0 | 4.44e-01 | 95.6% | 68.0% |
| 3838862 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 46.0 | 4.38e-01 | 80.9% | 85.2% |
| 4929290 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 44.0 | 4.63e-01 | 80.1% | 94.4% |
| 2010233 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.56 | 43.0 | 3.87e-01 | 81.6% | 58.1% |
| 1117756 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.56 | 43.0 | 3.88e-01 | 80.9% | 59.5% |
| 5078654 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 41.0 | 4.33e-01 | 75.7% | 90.8% |
| None | — | 0.55 | 40.0 | 3.25e-01 | 73.5% | 87.3% | |
| 1226838 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.55 | 39.0 | 3.21e-01 | 73.5% | 77.7% |
| 5025921 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 40.0 | 4.37e-01 | 77.2% | 97.3% |
| 4881452 | 7523.1.1.8 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 | 0.53 | 27.0 | 3.78e-01 | 74.3% | 100.0% |
| 2855730 | 327.18.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › Ribosomal_S7e | 0.53 | 31.0 | 3.72e-01 | 79.4% | 91.5% |
| 3924732 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.52 | 37.0 | 3.37e-01 | 72.8% | 76.3% |
| 4979211 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 37.0 | 3.42e-01 | 72.8% | 88.3% |
D2
high
residues 274-348
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i10A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 48.0 | 5.28e-01 | 89.3% | 91.7% |
| 3ff5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 40.0 | 4.59e-01 | 92.0% | 92.6% |
| 1uz3B00 | 1.10.1240.40 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain | 0.58 | 43.0 | 4.00e-01 | 100.0% | 61.9% |
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.57 | 44.0 | 4.30e-01 | 85.3% | 81.2% |
| 2dodA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.57 | 48.0 | 4.69e-01 | 98.7% | 86.6% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 42.0 | 3.67e-01 | 92.0% | 52.2% |
| 1ywfA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 39.0 | 2.79e-01 | 73.3% | 69.7% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 39.0 | 3.76e-01 | 74.7% | 85.1% |
| 2f76X00 | 1.10.150.490 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Retroviral GAG p10 protein | 0.55 | 40.0 | 3.74e-01 | 80.0% | 74.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 4.33e-01 | 90.7% | 100.0% |
| 4q5qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 40.0 | 3.62e-01 | 92.0% | 55.2% |
| 1e6bA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 39.0 | 3.43e-01 | 89.3% | 50.5% |
| 3f0cA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 39.0 | 3.19e-01 | 76.0% | 72.9% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 3.78e-01 | 90.7% | 73.3% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 40.0 | 3.61e-01 | 92.0% | 56.9% |
| 8a0rA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 42.0 | 3.56e-01 | 92.0% | 50.8% |
| 2qyuA04 | 1.10.4140.10 | Mainly Alpha › Orthogonal Bundle › effector protein (NleL) fold › effector protein (NleL) | 0.53 | 41.0 | 3.03e-01 | 82.7% | 100.0% |
| 2k19A00 | 1.20.1440.140 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 39.0 | 3.59e-01 | 78.7% | 88.8% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 43.0 | 4.23e-01 | 96.0% | 98.8% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 43.0 | 4.06e-01 | 96.0% | 100.0% |
| 4edgA01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.51 | 41.0 | 3.40e-01 | 88.0% | 81.3% |
| 4k7bA00 | 1.20.120.1740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sodium ion translocating NADH-quinone reductase subunit C-like | 0.50 | 45.0 | 3.97e-01 | 100.0% | 82.9% |
| 4g80T00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.50 | 43.0 | 3.55e-01 | 96.0% | 79.1% |
| 4mdvB03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.50 | 32.0 | 3.04e-01 | 94.7% | 52.7% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286520 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 53.0 | 5.68e-01 | 100.0% | 100.0% |
| 3167029 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.63 | 49.0 | 5.17e-01 | 96.0% | 96.9% |
| 4032781 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.59 | 41.0 | 3.64e-01 | 72.0% | 64.8% |
| 3345966 | 4133.1.1.0 ↗ | alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like | 0.59 | 45.0 | 4.51e-01 | 98.7% | 81.3% |
| 3270162 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 46.0 | 4.72e-01 | 85.3% | 98.6% |
| 4489939 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.56 | 41.0 | 4.51e-01 | 94.7% | 98.3% |
| 4013477 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.56 | 35.0 | 3.03e-01 | 77.3% | 42.7% |
| 3935987 | 210.1.2.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › CBAH,NAAA-beta | 0.54 | 44.0 | 2.86e-01 | 90.7% | 92.4% |
| 3919834 | 3755.4.1.52 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › TRIM_CC | 0.53 | 34.0 | 2.67e-01 | 76.0% | 33.1% |
| 3253938 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.53 | 37.0 | 3.28e-01 | 73.3% | 95.7% |
| 4028927 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.53 | 39.0 | 3.55e-01 | 80.0% | 92.4% |
| 59065 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.53 | 39.0 | 3.40e-01 | 88.0% | 49.6% |
| 5057804 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.53 | 39.0 | 3.96e-01 | 89.3% | 78.7% |
| 2392381 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.52 | 45.0 | 3.67e-01 | 100.0% | 51.7% |
| 4957532 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.50 | 37.0 | 3.07e-01 | 77.3% | 66.9% |
D3
medium
residues 160-220
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 46.0 | 3.58e-01 | 77.0% | 89.6% |
| 2pgxA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 39.0 | 2.76e-01 | 77.0% | 34.0% |
D4
medium
residues 221-272
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4tmaJ00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.67 | 47.0 | 4.59e-01 | 76.9% | 66.7% |
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.64 | 51.0 | 3.53e-01 | 88.5% | 98.4% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.63 | 42.0 | 4.72e-01 | 71.2% | 100.0% |
| 5hc2B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 48.0 | 2.99e-01 | 100.0% | 66.4% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.56 | 41.0 | 3.69e-01 | 80.8% | 62.3% |
| 4gklA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 36.0 | 3.10e-01 | 73.1% | 39.8% |
| 5c17A00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 41.0 | 2.85e-01 | 90.4% | 48.1% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 2.87e-01 | 80.8% | 97.1% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004198 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 46.0 | 5.13e-01 | 76.9% | 100.0% |
| 5065789 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 45.0 | 4.95e-01 | 75.0% | 87.5% |
| 4155531 | 377.1.1.15 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YacG | 0.66 | 46.0 | 4.70e-01 | 76.9% | 76.0% |
| 5039298 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 42.0 | 4.76e-01 | 71.2% | 100.0% |
| 4061693 | 101.28.1.1 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins › FlhC | 0.64 | 44.0 | 3.45e-01 | 73.1% | 91.3% |
| 3580898 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.59 | 42.0 | 3.02e-01 | 76.9% | 56.9% |
| 3706365 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 40.0 | 4.06e-01 | 71.2% | 100.0% |
| 4025629 | 375.3.1.1 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger › zf-DNL | 0.58 | 40.0 | 3.43e-01 | 73.1% | 45.9% |
| 3219831 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.55 | 38.0 | 3.65e-01 | 75.0% | 64.6% |
| 3208918 | 4135.1.1.0 ↗ | beta duplicates or obligate multimers › MAL13P1.257-like › MAL13P1.257-like › MAL13P1.257-like | 0.54 | 37.0 | 2.94e-01 | 75.0% | 38.3% |
| 5079543 | 212.1.1.3 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N | 0.53 | 42.0 | 2.98e-01 | 100.0% | 81.9% |
| 3483335 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 42.0 | 2.46e-01 | 100.0% | 41.7% |
| 3600115 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.52 | 40.0 | 2.54e-01 | 90.4% | 52.2% |
| 4002159 | 1073.1.1.1 ↗ | alpha arrays › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › MCU | 0.51 | 39.0 | 2.51e-01 | 86.5% | 15.4% |
| 3703840 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.50 | 35.0 | 2.49e-01 | 76.9% | 47.4% |