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IMGVR_UViG_3300022902_001387-3300022902-Ga0233429_10148065
Arc-VirIMGVR_UViG_3300022902_001387-3300022902-Ga0233429_10148065
Identity
- Kingdom:
- archaea
Quality
93.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-73
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kw6A00 | 6.10.140.1300 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 40.0 | 4.22e-01 | 100.0% | 53.8% |
| 8b9zK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 42.0 | 3.89e-01 | 100.0% | 46.2% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.68 | 41.0 | 3.07e-01 | 100.0% | 24.4% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.68 | 40.0 | 3.70e-01 | 95.8% | 47.7% |
| 3ccyA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 40.0 | 3.19e-01 | 100.0% | 29.3% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.66 | 42.0 | 3.34e-01 | 100.0% | 31.9% |
| 1aa7A02 | 1.10.10.180 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Influenza matrix protein M1, N-terminal subdomain 2 | 0.65 | 44.0 | 4.35e-01 | 71.8% | 73.1% |
| 3v53E00 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.57 | 47.0 | 4.26e-01 | 94.4% | 91.2% |
| 2yguC00 | 1.10.238.190 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.57 | 36.0 | 3.06e-01 | 98.6% | 37.3% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.55 | 48.0 | 4.36e-01 | 95.8% | 100.0% |
| 2ebfX02 | 1.20.140.180 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.53 | 40.0 | 3.14e-01 | 80.3% | 84.6% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.96e-01 | 93.0% | 98.9% |
| 4uw9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 46.0 | 4.36e-01 | 100.0% | 88.0% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.50 | 33.0 | 3.20e-01 | 90.1% | 59.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3290939 | 191.1.1.26 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_24 | 0.70 | 41.0 | 3.36e-01 | 98.6% | 31.5% |
| 3630665 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.66 | 45.0 | 4.45e-01 | 70.4% | 73.3% |
| 3621798 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.65 | 44.0 | 2.76e-01 | 70.4% | 73.1% |
| 3476280 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.58 | 53.0 | 3.74e-01 | 100.0% | 58.1% |
| 160885 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.58 | 40.0 | 4.29e-01 | 74.6% | 86.7% |
| 3923890 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.58 | 39.0 | 4.27e-01 | 71.8% | 100.0% |
| 3208922 | 6155.1.1.7 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › CLPTM1 | 0.57 | 41.0 | 3.39e-01 | 74.6% | 58.4% |
| 4997475 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 47.0 | 3.19e-01 | 98.6% | 39.6% |
| 3266498 | 3361.1.1.0 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 | 0.54 | 44.0 | 4.03e-01 | 87.3% | 72.2% |
| 3627611 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.53 | 37.0 | 2.77e-01 | 76.1% | 43.8% |
| 3813234 | 3161.1.1.1 ↗ | alpha duplicates or obligate multimers › LOB domain › LOB domain › LOB domain › LOB | 0.53 | 43.0 | 4.19e-01 | 88.7% | 86.3% |
| 4959130 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.51 | 39.0 | 4.00e-01 | 93.0% | 82.9% |
D2
high
residues 82-202
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cfrA00 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.50 | 38.0 | 2.93e-01 | 79.3% | 67.5% |