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IMGVR_UViG_3300022912_000697-3300022912-Ga0233430_10097601
Arc-VirIMGVR_UViG_3300022912_000697-3300022912-Ga0233430_10097601
Identity
- Kingdom:
- archaea
Quality
89.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-184
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.63 | 51.0 | 4.28e-01 | 86.3% | 94.0% |
| 1egaA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.61 | 36.0 | 4.59e-01 | 71.4% | 99.1% |
| 1i74A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.57 | 36.0 | 4.42e-01 | 75.8% | 97.5% |
| 6ll8A02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.56 | 36.0 | 4.28e-01 | 74.2% | 96.7% |
| 4isbB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.54 | 30.0 | 3.81e-01 | 70.3% | 91.6% |
| 4r0mA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.53 | 32.0 | 4.07e-01 | 74.7% | 100.0% |
| 4ls9B02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.53 | 34.0 | 4.05e-01 | 72.0% | 95.9% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 33.0 | 3.77e-01 | 78.0% | 84.0% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.52 | 38.0 | 4.28e-01 | 76.4% | 96.4% |
| 4py9A02 | 3.10.310.30 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.51 | 34.0 | 4.05e-01 | 73.6% | 97.6% |
| 3f5bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 3.84e-01 | 92.3% | 78.5% |
| 1lrzA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 34.0 | 3.82e-01 | 91.8% | 86.0% |
| 2jdcA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 34.0 | 3.79e-01 | 92.3% | 86.2% |
| 3ngqA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.50 | 44.0 | 3.66e-01 | 97.3% | 99.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3724739 | 2485.1.1.34 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx | 0.61 | 35.0 | 4.36e-01 | 94.0% | 92.7% |
| 3728676 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 48.0 | 4.41e-01 | 92.3% | 66.8% |
| 3729739 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.58 | 52.0 | 4.45e-01 | 96.7% | 84.5% |
| 4955488 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 32.0 | 4.04e-01 | 70.3% | 88.2% |
| 3179689 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 49.0 | 4.37e-01 | 90.7% | 72.7% |
| 4000801 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 36.0 | 4.27e-01 | 92.9% | 91.2% |
| 164523 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.57 | 37.0 | 4.39e-01 | 75.8% | 96.7% |
| 3612635 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 35.0 | 4.14e-01 | 90.1% | 89.6% |
| 4930883 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.57 | 35.0 | 4.39e-01 | 72.0% | 100.0% |
| 2715553 | 2008.1.1.34 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc | 0.57 | 37.0 | 4.35e-01 | 80.2% | 97.5% |
| 4628389 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.57 | 36.0 | 4.39e-01 | 72.0% | 97.5% |
| 4936990 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.56 | 36.0 | 4.33e-01 | 72.0% | 97.5% |
| 5038690 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 43.0 | 4.54e-01 | 80.2% | 90.6% |
| 4630823 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.56 | 35.0 | 4.36e-01 | 72.0% | 100.0% |
| 2599880 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.55 | 35.0 | 4.25e-01 | 74.2% | 96.7% |
| 3646034 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.53 | 39.0 | 4.22e-01 | 74.2% | 90.0% |
| 3514938 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.53 | 32.0 | 3.77e-01 | 81.9% | 88.3% |
| 4436952 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 37.0 | 4.24e-01 | 77.5% | 97.0% |
| 4973090 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.52 | 28.0 | 3.64e-01 | 90.7% | 93.0% |
| 3743228 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.52 | 41.0 | 4.22e-01 | 82.4% | 92.6% |
| 4016812 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.52 | 39.0 | 4.20e-01 | 76.9% | 94.8% |
| 4026339 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.52 | 39.0 | 4.23e-01 | 76.4% | 100.0% |
| 3835553 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.52 | 41.0 | 4.07e-01 | 81.3% | 93.5% |
| 4100091 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 45.0 | 4.09e-01 | 94.5% | 88.4% |
| 4932677 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.52 | 34.0 | 4.10e-01 | 77.5% | 100.0% |
| 3506091 | 3351.1.1.1 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N | 0.51 | 41.0 | 4.08e-01 | 82.4% | 91.9% |
| 3788787 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.51 | 38.0 | 4.17e-01 | 76.4% | 100.0% |
| 4418038 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 33.0 | 4.00e-01 | 73.6% | 99.2% |
| 2658958 | 265.1.1.1 ↗ | a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat | 0.51 | 33.0 | 3.86e-01 | 90.7% | 94.4% |
| 3870810 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 36.0 | 2.13e-01 | 72.0% | 18.8% |
| 3526787 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.50 | 31.0 | 3.52e-01 | 82.4% | 82.3% |
| 3827633 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.50 | 26.0 | 3.02e-01 | 97.3% | 65.4% |
D2
high
residues 409-496
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.56 | 40.0 | 3.55e-01 | 75.0% | 100.0% |
| 3a98B01 | 6.10.10.90 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.56 | 27.0 | 2.88e-01 | 100.0% | 48.1% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.51 | 37.0 | 2.79e-01 | 77.3% | 91.3% |
| 1ygmA01 | 1.10.220.90 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Mistic | 0.51 | 35.0 | 3.49e-01 | 70.5% | 74.4% |
| 1vfiA00 | 1.10.246.100 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 | 0.50 | 34.0 | 3.33e-01 | 78.4% | 63.2% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4246144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 33.0 | 3.49e-01 | 79.5% | 50.0% |
| 7966 | 4330.1.1.1 ↗ | few secondary structure elements › Vanabin-like › Vanabin-like › Vanabin-like › Vanabin-2 | 0.52 | 33.0 | 3.30e-01 | 71.6% | 62.0% |
| 4012137 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.50 | 38.0 | 3.32e-01 | 81.8% | 90.4% |
D3
medium
residues 187-252
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.75 | 52.0 | 4.38e-01 | 71.2% | 48.5% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 53.0 | 4.91e-01 | 74.2% | 71.6% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 53.0 | 4.45e-01 | 74.2% | 60.0% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 49.0 | 5.10e-01 | 74.2% | 75.0% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 51.0 | 4.47e-01 | 74.2% | 66.7% |
| 1ku9A02 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 52.0 | 5.27e-01 | 75.8% | 76.6% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 50.0 | 3.92e-01 | 74.2% | 35.1% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 54.0 | 5.61e-01 | 78.8% | 85.2% |
| 1j30A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 52.0 | 3.97e-01 | 75.8% | 37.6% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.71 | 51.0 | 5.21e-01 | 74.2% | 79.7% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 48.0 | 4.51e-01 | 72.7% | 59.0% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 58.0 | 5.35e-01 | 90.9% | 69.4% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.71 | 58.0 | 3.86e-01 | 90.9% | 22.5% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.70 | 53.0 | 5.14e-01 | 90.9% | 73.0% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 51.0 | 4.88e-01 | 80.3% | 84.6% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.67 | 47.0 | 4.76e-01 | 72.7% | 78.1% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.67 | 47.0 | 4.22e-01 | 72.7% | 75.6% |
| 2btqB03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 41.0 | 4.52e-01 | 71.2% | 77.4% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.66 | 44.0 | 4.10e-01 | 71.2% | 55.4% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.66 | 47.0 | 4.74e-01 | 78.8% | 76.9% |
| 5hxgB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.65 | 49.0 | 4.93e-01 | 78.8% | 100.0% |
| 4v1gA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.65 | 52.0 | 4.81e-01 | 86.4% | 68.2% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.65 | 60.0 | 4.69e-01 | 100.0% | 83.8% |
| 2h9dD00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.64 | 52.0 | 4.46e-01 | 97.0% | 57.0% |
| 2avuB00 | 1.10.4000.10 | Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD | 0.64 | 47.0 | 4.01e-01 | 77.3% | 63.5% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.64 | 48.0 | 3.71e-01 | 80.3% | 37.8% |
| 2x2vA00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.64 | 50.0 | 5.00e-01 | 86.4% | 85.3% |
| 4gczA03 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.63 | 45.0 | 4.61e-01 | 86.4% | 76.9% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 44.0 | 4.05e-01 | 74.2% | 57.8% |
| 5svlA01 | 1.10.287.940 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel | 0.61 | 51.0 | 5.08e-01 | 93.9% | 97.1% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.61 | 46.0 | 4.18e-01 | 92.4% | 59.8% |
| 3teqB00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 53.0 | 4.53e-01 | 93.9% | 92.1% |
| 2mpnA00 | 6.10.140.1340 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 44.0 | 4.45e-01 | 86.4% | 79.4% |
| 2l35A00 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.58 | 45.0 | 4.63e-01 | 92.4% | 88.9% |
| 4q20A01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.57 | 50.0 | 4.73e-01 | 100.0% | 86.6% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 47.0 | 4.75e-01 | 93.9% | 94.0% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 44.0 | 4.23e-01 | 90.9% | 96.2% |
| 1u9pA00 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.53 | 41.0 | 3.70e-01 | 86.4% | 72.9% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 4.41e-01 | 97.0% | 95.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2663455 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.81 | 56.0 | 5.57e-01 | 77.3% | 69.1% |
| 3239865 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.80 | 56.0 | 4.29e-01 | 74.2% | 35.6% |
| 4411856 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.76 | 57.0 | 4.99e-01 | 78.8% | 83.2% |
| 4424778 | 605.2.1.3 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › Seryl_tRNA_N | 0.76 | 54.0 | 4.49e-01 | 74.2% | 45.5% |
| 4263341 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.75 | 53.0 | 4.38e-01 | 74.2% | 55.7% |
| 3224423 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.74 | 55.0 | 5.88e-01 | 80.3% | 100.0% |
| 3296414 | 192.29.1.168 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF641 | 0.74 | 54.0 | 5.28e-01 | 75.8% | 75.7% |
| 3944950 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 51.0 | 5.22e-01 | 74.2% | 84.6% |
| 4946455 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 52.0 | 4.91e-01 | 75.8% | 66.3% |
| 3848917 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.72 | 52.0 | 4.71e-01 | 74.2% | 74.1% |
| 3764851 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.72 | 54.0 | 4.77e-01 | 77.3% | 61.1% |
| 3560750 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.72 | 55.0 | 5.38e-01 | 80.3% | 80.0% |
| 4964259 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.71 | 46.0 | 5.06e-01 | 81.8% | 80.0% |
| 3306934 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.70 | 55.0 | 4.58e-01 | 83.3% | 89.1% |
| 4106620 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.70 | 52.0 | 5.00e-01 | 78.8% | 88.0% |
| 3221765 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.68 | 48.0 | 4.20e-01 | 74.2% | 51.0% |
| 5041271 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.67 | 50.0 | 4.84e-01 | 80.3% | 88.0% |
| 4026843 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.67 | 55.0 | 5.45e-01 | 93.9% | 94.3% |
| 3455580 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.66 | 47.0 | 3.21e-01 | 80.3% | 20.4% |
| 3787915 | 3711.1.1.15 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › PXB | 0.65 | 50.0 | 3.57e-01 | 83.3% | 61.0% |
| 3975851 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.61 | 47.0 | 4.65e-01 | 84.8% | 80.0% |
| 3961597 | 7579.1.1.62 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_8 | 0.59 | 53.0 | 3.30e-01 | 97.0% | 51.5% |
| 2485668 | 7025.1.1.2 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C | 0.59 | 49.0 | 4.48e-01 | 87.9% | 72.6% |
D4
medium
residues 253-364
Domain cluster:
representative