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IMGVR_UViG_3300023022_000055-3300023022-Ga0233362_100024313
Arc-VirIMGVR_UViG_3300023022_000055-3300023022-Ga0233362_100024313
Identity
- Kingdom:
- archaea
Quality
85.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-58
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b0zA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.67 | 60.0 | 3.96e-01 | 100.0% | 48.0% |
| 4dkjA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 50.0 | 3.16e-01 | 98.2% | 53.7% |
| 3m92A01 | 3.30.300.360 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Protein of unknown function (DUF2498) | 0.53 | 38.0 | 3.54e-01 | 100.0% | 60.9% |
| 4fxxB01 | 6.10.140.1790 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 45.0 | 4.18e-01 | 93.0% | 76.4% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.53 | 45.0 | 3.88e-01 | 93.0% | 95.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059124 | 231.1.1.2 ↗ | a+b two layers › MocoBD/DmpA-related › MocoBD/DmpA-related › Molybdenum cofactor-binding domain › MoCoBD_2 | 0.56 | 49.0 | 3.11e-01 | 98.2% | 90.5% |
| 4027541 | 7504.1.1.1 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like | 0.56 | 47.0 | 3.28e-01 | 96.5% | 97.0% |
| 3350068 | 633.22.1.1 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › VKOR | 0.54 | 46.0 | 3.33e-01 | 94.7% | 44.8% |
| 3398987 | 109.30.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 › Nup84_Nup100 | 0.54 | 47.0 | 2.76e-01 | 100.0% | 43.5% |
| 3896442 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.54 | 47.0 | 3.52e-01 | 100.0% | 61.3% |
| 4557434 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 38.0 | 2.43e-01 | 75.4% | 18.5% |
| 3684136 | 604.1.1.154 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF27021 | 0.52 | 47.0 | 3.76e-01 | 100.0% | 82.7% |
| 2870881 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.52 | 43.0 | 3.59e-01 | 98.2% | 53.6% |
| None | — | 0.52 | 41.0 | 2.37e-01 | 100.0% | 47.9% | |
| 3721011 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.51 | 37.0 | 2.34e-01 | 100.0% | 13.9% |
| 3263287 | 150.7.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE | 0.50 | 43.0 | 3.78e-01 | 94.7% | 68.2% |