Back to structures

IMGVR_UViG_3300023113_000039-3300023113-Ga0136585_1009548

Arc-Vir

IMGVR_UViG_3300023113_000039-3300023113-Ga0136585_1009548

Quality

90.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-35
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tvcA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.59 47.0 3.01e-01 100.0% 18.6%
1evlA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 39.0 2.91e-01 93.9% 33.9%
5mteA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.51 40.0 2.78e-01 97.0% 46.7%
4p25D01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.51 35.0 2.38e-01 93.9% 67.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3356595 252.1.1.2 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › DUF7028 0.58 40.0 3.38e-01 78.8% 40.0%
4670420 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.51 39.0 2.97e-01 90.9% 36.2%