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IMGVR_UViG_3300023173_001715-3300023173-Ga0255776_100288841
Arc-VirIMGVR_UViG_3300023173_001715-3300023173-Ga0255776_100288841
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-72
Domain cluster:
rep: IMGVR_UViG_3300026205_000020-3300026205-Ga0208406_10009714__D12-71
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21379.3 best | Gp6-like_1st | 55.1 | 7.50e-15 | 100.0% | 82.4% |
D2
high
residues 93-168_268-300
Domain cluster:
rep: ON615601.1__UTS51996.1__X__00048__D90-151_251-276
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 34.0 | 4.14e-01 | 96.3% | 74.0% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 42.0 | 4.68e-01 | 86.2% | 82.6% |
| 6hhuA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 42.0 | 4.77e-01 | 95.4% | 93.6% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 34.0 | 3.80e-01 | 96.3% | 65.5% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 48.0 | 5.13e-01 | 100.0% | 95.7% |
| 4lfhD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 38.0 | 4.29e-01 | 87.2% | 80.0% |
| 6a2bB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 42.0 | 4.55e-01 | 89.9% | 81.9% |
| 1r75A00 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 36.0 | 3.60e-01 | 98.2% | 58.2% |
| 2ra1A04 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 4.62e-01 | 98.2% | 88.7% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 4.25e-01 | 94.5% | 83.0% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 45.0 | 4.74e-01 | 97.2% | 94.7% |
| 1a6aB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 4.30e-01 | 89.9% | 80.6% |
| 4aq1A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 40.0 | 4.27e-01 | 98.2% | 83.0% |
| 3n79A01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.58 | 40.0 | 4.68e-01 | 93.6% | 100.0% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 4.35e-01 | 93.6% | 84.8% |
| 2c9aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 41.0 | 4.39e-01 | 97.2% | 84.5% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.57 | 32.0 | 3.49e-01 | 87.2% | 65.2% |
| 4f80A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 4.29e-01 | 98.2% | 84.9% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.57 | 39.0 | 3.85e-01 | 78.9% | 63.9% |
| 5h5zA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 4.25e-01 | 88.1% | 86.4% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.57 | 40.0 | 4.46e-01 | 91.7% | 92.9% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.29e-01 | 93.6% | 83.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.56 | 39.0 | 3.82e-01 | 89.9% | 65.8% |
| 1k8iB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.24e-01 | 98.2% | 81.8% |
| 5wl1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.23e-01 | 92.7% | 81.2% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.56 | 38.0 | 3.90e-01 | 81.7% | 72.1% |
| 2w2sA00 | 3.10.460.20 | Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 | 0.56 | 49.0 | 4.32e-01 | 98.2% | 68.7% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 40.0 | 4.06e-01 | 98.2% | 78.1% |
| 3f8uD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.41e-01 | 99.1% | 85.8% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 4.22e-01 | 98.2% | 82.7% |
| 2fe0A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 33.0 | 3.41e-01 | 97.2% | 61.7% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 4.19e-01 | 100.0% | 80.7% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 46.0 | 4.68e-01 | 97.2% | 95.3% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 48.0 | 4.82e-01 | 100.0% | 97.3% |
| 4q9cA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.88e-01 | 100.0% | 77.1% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.53 | 35.0 | 3.87e-01 | 77.1% | 91.1% |
| 4q97A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.80e-01 | 98.2% | 75.9% |
| 3w1eA01 | 3.30.1660.40 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › FlgT, N-terminal domain | 0.52 | 37.0 | 4.00e-01 | 73.4% | 100.0% |
| 3mjgX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.80e-01 | 99.1% | 84.9% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.43e-01 | 81.7% | 72.7% |
| 1o0vA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.84e-01 | 95.4% | 78.2% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.52 | 42.0 | 4.16e-01 | 91.7% | 84.1% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 39.0 | 3.41e-01 | 79.8% | 70.7% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.51 | 38.0 | 3.68e-01 | 89.0% | 68.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.51 | 41.0 | 3.83e-01 | 88.1% | 90.4% |
| 4z85A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 38.0 | 3.18e-01 | 79.8% | 60.4% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 4.00e-01 | 98.2% | 78.2% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4257138 | 11.1.1.581 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Tag1_C | 0.66 | 59.0 | 5.28e-01 | 98.2% | 86.3% |
| 5022719 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 41.0 | 4.40e-01 | 96.3% | 74.7% |
| 3935805 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.63 | 38.0 | 4.21e-01 | 88.1% | 75.3% |
| 3618810 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.63 | 49.0 | 4.77e-01 | 100.0% | 76.3% |
| 3966451 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 47.0 | 4.95e-01 | 100.0% | 92.6% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 40.0 | 4.31e-01 | 85.3% | 76.8% |
| 3970015 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.61 | 37.0 | 3.96e-01 | 78.9% | 69.1% |
| 4071075 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 48.0 | 4.93e-01 | 100.0% | 87.6% |
| 4129006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 47.0 | 5.01e-01 | 100.0% | 94.7% |
| 3504502 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 48.0 | 4.73e-01 | 100.0% | 80.7% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 39.0 | 4.23e-01 | 84.4% | 78.9% |
| 4257535 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.60 | 42.0 | 4.15e-01 | 89.9% | 67.8% |
| 3830759 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.60 | 47.0 | 4.75e-01 | 100.0% | 84.5% |
| 4532867 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 41.0 | 3.85e-01 | 89.0% | 59.2% |
| 4470732 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.59 | 43.0 | 4.44e-01 | 91.7% | 82.0% |
| 4880638 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.59 | 41.0 | 4.06e-01 | 89.9% | 67.8% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.59 | 41.0 | 4.28e-01 | 85.3% | 79.0% |
| 3660388 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 39.0 | 4.21e-01 | 98.2% | 83.3% |
| 2526492 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.58 | 40.0 | 4.20e-01 | 89.0% | 78.6% |
| 3704078 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.58 | 40.0 | 4.35e-01 | 97.2% | 86.7% |
| 2658216 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.58 | 41.0 | 4.29e-01 | 98.2% | 81.6% |
| 3853561 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.57 | 38.0 | 4.11e-01 | 99.1% | 82.2% |
| 3896293 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.57 | 41.0 | 4.26e-01 | 91.7% | 80.0% |
| 4220882 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.57 | 41.0 | 3.64e-01 | 92.7% | 52.3% |
| 3371896 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.57 | 45.0 | 4.44e-01 | 100.0% | 79.8% |
| 3321290 | 11.1.1.902 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GEX2_N | 0.56 | 44.0 | 4.36e-01 | 100.0% | 80.0% |
| 3838195 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.56 | 45.0 | 3.58e-01 | 88.1% | 87.6% |
| 3286458 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 44.0 | 4.24e-01 | 85.3% | 73.6% |
| 5081561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 36.0 | 4.05e-01 | 76.1% | 88.7% |
| 3489014 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.56 | 49.0 | 4.46e-01 | 98.2% | 72.0% |
| 4072484 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.56 | 40.0 | 4.30e-01 | 98.2% | 91.1% |
| 4487049 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 35.0 | 3.01e-01 | 89.9% | 38.3% |
| 5044479 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 4.15e-01 | 89.9% | 80.0% |
| 3743321 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.55 | 48.0 | 3.50e-01 | 97.2% | 48.1% |
| 3554237 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.55 | 41.0 | 3.87e-01 | 99.1% | 64.4% |
| 3721508 | 11.1.1.122 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set | 0.55 | 42.0 | 4.23e-01 | 97.2% | 83.6% |
| 5077659 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.54 | 47.0 | 4.75e-01 | 100.0% | 95.5% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.54 | 45.0 | 4.36e-01 | 100.0% | 80.0% |
| 3885958 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 37.0 | 4.04e-01 | 82.6% | 88.2% |
| 3859218 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 46.0 | 4.52e-01 | 94.5% | 100.0% |
| 3810286 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.54 | 48.0 | 3.99e-01 | 100.0% | 59.0% |
| 3592387 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.54 | 48.0 | 3.99e-01 | 100.0% | 97.9% |
| 3718978 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.53 | 48.0 | 4.52e-01 | 100.0% | 89.6% |
| 3929182 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.53 | 41.0 | 4.12e-01 | 98.2% | 81.8% |
| 185291 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.53 | 35.0 | 3.85e-01 | 77.1% | 90.0% |
| 3542453 | 11.1.1.54 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 | 0.52 | 40.0 | 3.89e-01 | 97.2% | 73.6% |
| 3815478 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.52 | 39.0 | 3.30e-01 | 98.2% | 45.8% |
| 3550747 | 11.1.1.189 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTCRA | 0.52 | 37.0 | 3.81e-01 | 100.0% | 78.1% |
| 3555079 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.51 | 44.0 | 3.98e-01 | 100.0% | 69.0% |
| 3930387 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 4.12e-01 | 100.0% | 81.7% |
| 3932700 | 271.1.1.5 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › G2F | 0.51 | 37.0 | 3.03e-01 | 78.0% | 77.4% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.50 | 37.0 | 3.31e-01 | 78.9% | 76.2% |
| 4565519 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.50 | 42.0 | 4.00e-01 | 90.8% | 86.9% |
D3
high
residues 171-266
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g0dA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 58.0 | 5.18e-01 | 100.0% | 86.1% |
| 8begA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 58.0 | 4.88e-01 | 100.0% | 67.1% |
| 2w38A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 58.0 | 5.66e-01 | 100.0% | 100.0% |
| 4mboA02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 58.0 | 4.87e-01 | 100.0% | 63.7% |
| 4kx7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.63 | 47.0 | 3.68e-01 | 100.0% | 35.6% |
| 1n67A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 49.0 | 4.29e-01 | 100.0% | 56.7% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.63 | 45.0 | 4.59e-01 | 100.0% | 78.5% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 43.0 | 4.62e-01 | 92.7% | 86.3% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 47.0 | 4.15e-01 | 100.0% | 55.9% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 51.0 | 5.33e-01 | 100.0% | 100.0% |
| 2cw5A02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.60 | 48.0 | 4.98e-01 | 97.9% | 94.4% |
| 2waoA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 43.0 | 4.12e-01 | 100.0% | 64.9% |
| 2q6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.59 | 51.0 | 5.07e-01 | 97.9% | 95.1% |
| 3alxC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 49.0 | 4.84e-01 | 96.9% | 85.4% |
| 1r0aH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 52.0 | 4.81e-01 | 100.0% | 90.2% |
| 3bvxA05 | 2.60.40.1360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 43.0 | 4.36e-01 | 100.0% | 77.1% |
| 7mxdX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 51.0 | 4.76e-01 | 97.9% | 81.5% |
| 4pjeE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 49.0 | 4.75e-01 | 100.0% | 84.3% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 43.0 | 4.59e-01 | 99.0% | 96.2% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.58 | 49.0 | 4.89e-01 | 96.9% | 94.1% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 33.0 | 3.72e-01 | 84.4% | 74.3% |
| 1hkfA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.69e-01 | 95.8% | 86.1% |
| 2crmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.37e-01 | 96.9% | 92.4% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.56 | 47.0 | 4.81e-01 | 96.9% | 97.9% |
| 2oznA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 3.80e-01 | 100.0% | 58.6% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 39.0 | 3.48e-01 | 97.9% | 49.7% |
| 5hccB03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 49.0 | 4.54e-01 | 100.0% | 83.5% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 46.0 | 4.70e-01 | 100.0% | 97.8% |
| 5u55A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 35.0 | 3.23e-01 | 100.0% | 50.0% |
| 3nngA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 47.0 | 4.09e-01 | 100.0% | 62.1% |
| 1oh4A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 3.84e-01 | 100.0% | 94.8% |
| 6ec6A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 47.0 | 3.79e-01 | 100.0% | 92.4% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 4.29e-01 | 99.0% | 89.5% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.52 | 39.0 | 3.82e-01 | 99.0% | 72.6% |
| 3up1B01 | 2.60.40.1870 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 4.11e-01 | 99.0% | 87.1% |
| 1a3qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 4.29e-01 | 99.0% | 89.8% |
| 2yfuA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.08e-01 | 100.0% | 97.9% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 36.0 | 3.35e-01 | 71.9% | 88.3% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 43.0 | 4.27e-01 | 99.0% | 93.4% |
| 2qcsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 34.0 | 3.20e-01 | 100.0% | 54.4% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 44.0 | 4.31e-01 | 100.0% | 98.1% |
| 5lxvA01 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 44.0 | 3.72e-01 | 100.0% | 57.7% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004555 | 11.41.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain | 0.79 | 75.0 | 6.74e-01 | 100.0% | 95.2% |
| 5036760 | 11.41.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain | 0.76 | 71.0 | 7.06e-01 | 100.0% | 97.0% |
| 5081050 | 4275.1.1.11 ↗ | alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › SU10_adaptor | 0.70 | 56.0 | 4.35e-01 | 100.0% | 41.0% |
| 3580256 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.68 | 51.0 | 5.16e-01 | 100.0% | 78.9% |
| 3520927 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.67 | 50.0 | 3.85e-01 | 100.0% | 34.5% |
| 3794026 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.66 | 41.0 | 4.34e-01 | 85.4% | 70.6% |
| 4944190 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.66 | 60.0 | 4.50e-01 | 100.0% | 46.2% |
| 4538527 | 11.1.5.50 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 | 0.65 | 60.0 | 4.90e-01 | 100.0% | 63.5% |
| 3554031 | 11.1.1.297 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Integrin_A_Ig_2 | 0.65 | 47.0 | 4.19e-01 | 100.0% | 52.9% |
| 3516960 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.65 | 47.0 | 4.49e-01 | 100.0% | 66.4% |
| 4189335 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.63 | 41.0 | 4.36e-01 | 100.0% | 76.2% |
| 3563675 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.62 | 45.0 | 4.56e-01 | 99.0% | 76.8% |
| 5002954 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.62 | 47.0 | 3.94e-01 | 100.0% | 46.5% |
| 5033534 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.61 | 52.0 | 5.20e-01 | 96.9% | 95.0% |
| 4032846 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.60 | 52.0 | 4.97e-01 | 94.8% | 92.7% |
| 4943639 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 45.0 | 4.75e-01 | 100.0% | 91.8% |
| 5049603 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.60 | 51.0 | 5.02e-01 | 96.9% | 97.1% |
| 5011401 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.59 | 52.0 | 5.12e-01 | 100.0% | 89.5% |
| 4322227 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.59 | 52.0 | 5.03e-01 | 99.0% | 91.8% |
| 3324171 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 36.0 | 4.12e-01 | 90.6% | 84.3% |
| 5035333 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.59 | 51.0 | 5.10e-01 | 97.9% | 94.0% |
| 4992085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 46.0 | 4.76e-01 | 100.0% | 91.1% |
| 3286491 | 4178.1.1.1 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 | 0.58 | 51.0 | 4.30e-01 | 100.0% | 57.5% |
| 4556105 | 11.1.5.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › CBM_2 | 0.58 | 41.0 | 4.20e-01 | 100.0% | 77.8% |
| 5058603 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.58 | 50.0 | 4.83e-01 | 96.9% | 91.8% |
| 3616755 | 11.1.1.818 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TPPC8_2nd | 0.58 | 46.0 | 3.69e-01 | 100.0% | 44.4% |
| 4990427 | 1.1.4.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C | 0.58 | 50.0 | 4.96e-01 | 97.9% | 95.1% |
| 3797460 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 46.0 | 3.69e-01 | 100.0% | 44.4% |
| 3783233 | 4081.1.1.7 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Ribophorin_I | 0.58 | 43.0 | 3.46e-01 | 100.0% | 39.0% |
| 5083741 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 45.0 | 4.38e-01 | 100.0% | 75.5% |
| 3873369 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.57 | 48.0 | 4.99e-01 | 95.8% | 100.0% |
| 5062347 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 41.0 | 4.53e-01 | 100.0% | 97.3% |
| 2729217 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.57 | 48.0 | 4.66e-01 | 92.7% | 91.6% |
| 3491160 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.57 | 46.0 | 3.96e-01 | 100.0% | 56.0% |
| 4971476 | 2499.1.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like | 0.56 | 48.0 | 3.35e-01 | 100.0% | 26.4% |
| 3230557 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 39.0 | 3.84e-01 | 93.8% | 66.7% |
| 3394080 | 12.1.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyc_hyd_38C_2 | 0.56 | 41.0 | 4.16e-01 | 100.0% | 79.6% |
| 3186985 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 39.0 | 4.31e-01 | 99.0% | 96.0% |
| 3653845 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.54 | 48.0 | 4.00e-01 | 99.0% | 94.1% |
| 3934435 | 4081.1.1.13 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF4139 | 0.54 | 40.0 | 3.60e-01 | 100.0% | 55.0% |
| 3298366 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.53 | 47.0 | 3.66e-01 | 100.0% | 79.1% |
| 3595112 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 46.0 | 3.85e-01 | 100.0% | 82.7% |
| 5069275 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 47.0 | 4.52e-01 | 99.0% | 89.1% |
| 3676352 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.53 | 47.0 | 3.81e-01 | 99.0% | 98.9% |
| 4496880 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.53 | 48.0 | 3.86e-01 | 100.0% | 90.8% |
| 5062018 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 43.0 | 3.75e-01 | 100.0% | 58.0% |
| 4027485 | 10.32.1.28 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC | 0.52 | 45.0 | 3.84e-01 | 100.0% | 56.5% |
| 3432142 | 10.32.1.198 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PP2 | 0.52 | 46.0 | 3.55e-01 | 99.0% | 80.0% |
| 5040272 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 38.0 | 4.09e-01 | 99.0% | 96.2% |
| 3264558 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 45.0 | 4.05e-01 | 99.0% | 88.1% |
| 330281 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.51 | 44.0 | 3.38e-01 | 100.0% | 64.3% |
| 3933690 | 10.32.1.181 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TMEM145_N | 0.51 | 43.0 | 3.93e-01 | 100.0% | 87.1% |