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IMGVR_UViG_3300023178_003052-3300023178-Ga0255759_100081211
Arc-VirIMGVR_UViG_3300023178_003052-3300023178-Ga0255759_100081211
Identity
- Kingdom:
- archaea
Quality
68.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 253-472_1365-1486
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.65 | 23.0 | 4.10e-01 | 94.7% | 98.2% |
| 4hscX04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.63 | 23.0 | 3.99e-01 | 94.2% | 99.1% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.61 | 19.0 | 3.22e-01 | 98.8% | 75.9% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.56 | 22.0 | 3.49e-01 | 93.6% | 94.2% |
| 3j4uH00 | 2.60.120.1110 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 17.0 | 2.62e-01 | 95.6% | 63.6% |
| 5mw5A01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 24.0 | 3.50e-01 | 95.3% | 94.7% |
| 2xtlA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 19.0 | 3.34e-01 | 79.5% | 98.3% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.51 | 24.0 | 3.46e-01 | 100.0% | 93.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3259121 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 20.0 | 3.46e-01 | 98.8% | 70.4% |
| 4115421 | 11.15.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C | 0.66 | 24.0 | 4.05e-01 | 94.7% | 94.8% |
| 1108811 | 11.15.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C | 0.65 | 23.0 | 4.06e-01 | 94.2% | 98.2% |
| 1883531 | 11.15.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Perfringolysin O beta sandwich domain › Perfringolysin O beta sandwich domain › Thiol_cytolys_C | 0.65 | 23.0 | 4.06e-01 | 94.4% | 98.2% |
| 3490438 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.63 | 21.0 | 3.37e-01 | 98.2% | 74.1% |
| 3415160 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.56 | 20.0 | 3.33e-01 | 98.0% | 88.0% |
| 3490679 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 25.0 | 3.54e-01 | 97.7% | 89.0% |
| 3546856 | 11.1.1.852 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28276 | 0.53 | 21.0 | 3.17e-01 | 98.2% | 83.6% |
| 3751742 | 11.1.1.229 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IRK_C | 0.53 | 25.0 | 3.34e-01 | 96.8% | 78.9% |
| 4011994 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 15.0 | 2.63e-01 | 93.6% | 71.8% |
| 3915577 | 11.1.1.852 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28276 | 0.52 | 21.0 | 2.87e-01 | 97.7% | 68.9% |
| 3847753 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.51 | 28.0 | 3.62e-01 | 98.2% | 92.6% |
| 5038245 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.50 | 16.0 | 2.63e-01 | 93.6% | 73.9% |
D2
medium
residues 16-70_153-168_220-252
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4086954_prodigal-single.1__X__X__00068__D1-62_155-170_233-257
D3
medium
residues 71-152_169-219
Domain cluster:
representative
D4
medium
residues 473-598
Domain cluster:
representative
D5
medium
residues 689-715_1123-1164
D6
medium
residues 716-799_843-886_898-975_1226-1271
D7
medium
residues 976-1013_1026-1066_1165-1187
D8
medium
residues 1272-1364
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kz6A01 | 6.10.140.1310 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 37.0 | 4.00e-01 | 83.9% | 71.6% |
| 6dlzA01 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.53 | 41.0 | 3.30e-01 | 82.8% | 90.1% |
| 1io7A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 44.0 | 3.04e-01 | 97.8% | 35.2% |
| 5ermB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.50 | 43.0 | 3.01e-01 | 95.7% | 68.8% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4057499 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.51 | 43.0 | 4.06e-01 | 92.5% | 76.5% |
| 4163347 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.51 | 44.0 | 4.04e-01 | 94.6% | 78.3% |
| 4112209 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.51 | 44.0 | 4.04e-01 | 94.6% | 86.7% |
| 4244236 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.51 | 44.0 | 4.20e-01 | 96.8% | 92.7% |
| 4590834 | 3681.1.1.0 ↗ | a+b complex topology › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit › Helical hairpin insertion in E. coli DNA-directed RNA polymerase beta subunit | 0.51 | 43.0 | 4.02e-01 | 94.6% | 75.7% |
| 3211945 | 633.23.1.14 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_3 | 0.50 | 39.0 | 3.24e-01 | 97.8% | 46.5% |
D9
medium
residues 1519-1674