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IMGVR_UViG_3300023207_001699-3300023207-Ga0255811_104768723
Arc-VirIMGVR_UViG_3300023207_001699-3300023207-Ga0255811_104768723
Identity
- Kingdom:
- archaea
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-91_141-264
Domain cluster:
representative
Pfam (2)
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h4kA01 | 3.30.70.2940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.75 | 33.0 | 5.13e-01 | 91.6% | 100.0% |
| 4mjkA00 | 3.30.70.3120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 58.0 | 5.64e-01 | 94.4% | 100.0% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 32.0 | 4.23e-01 | 91.2% | 96.5% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 32.0 | 4.15e-01 | 92.1% | 92.6% |
| 1r9wA00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.57 | 32.0 | 3.79e-01 | 94.4% | 81.2% |
| 1pbuA00 | 3.30.70.1010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain | 0.55 | 33.0 | 3.79e-01 | 97.7% | 77.8% |
| 5t0oA02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.54 | 28.0 | 3.80e-01 | 97.2% | 100.0% |
| 3qc5X01 | 2.60.40.3260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 24.0 | 2.86e-01 | 93.0% | 58.9% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3591484 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 31.0 | 4.93e-01 | 88.4% | 95.6% |
| 4989935 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.71 | 38.0 | 5.20e-01 | 89.3% | 99.1% |
| 4944267 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.70 | 63.0 | 6.07e-01 | 95.8% | 100.0% |
| 4093127 | 304.158.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs | 0.66 | 59.0 | 5.73e-01 | 95.3% | 100.0% |
| 1348630 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.65 | 59.0 | 5.72e-01 | 95.3% | 100.0% |
| 5004209 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.65 | 60.0 | 5.35e-01 | 98.1% | 99.7% |
| 5036749 | 304.51.1.12 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6_N | 0.62 | 37.0 | 4.68e-01 | 87.4% | 100.0% |
| 4877693 | 304.158.1.2 ↗ | a+b two layers › Alpha-beta plaits › CRISPR system Cas5 homologs › CRISPR system Cas5 homologs › Cas_Cas5d | 0.59 | 52.0 | 4.90e-01 | 92.6% | 88.7% |
| 4004564 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.58 | 32.0 | 3.29e-01 | 91.6% | 54.6% |
| 5022736 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 48.0 | 4.10e-01 | 92.6% | 84.8% |
| 5077887 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.54 | 46.0 | 4.67e-01 | 88.8% | 91.6% |
| 3663871 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.53 | 22.0 | 3.40e-01 | 90.2% | 96.5% |
| 5078807 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.52 | 45.0 | 4.32e-01 | 90.7% | 93.6% |
| 5042763 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.51 | 45.0 | 4.74e-01 | 90.7% | 100.0% |
| 4113514 | 304.51.1.6 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cmr3 | 0.51 | 43.0 | 4.41e-01 | 87.4% | 100.0% |