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IMGVR_UViG_3300023276_001218-3300023276-Ga0233410_100012234
Arc-VirIMGVR_UViG_3300023276_001218-3300023276-Ga0233410_100012234
Identity
- Kingdom:
- archaea
Quality
49.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 82-171
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.70 | 36.0 | 3.53e-01 | 94.4% | 46.3% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.68 | 42.0 | 4.48e-01 | 84.4% | 71.2% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.62 | 30.0 | 3.26e-01 | 81.1% | 51.9% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.61 | 46.0 | 4.15e-01 | 81.1% | 70.3% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 42.0 | 2.84e-01 | 100.0% | 20.3% |
| 1yb3A00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 46.0 | 3.77e-01 | 85.6% | 66.7% |
| 1eucB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 49.0 | 4.09e-01 | 94.4% | 54.8% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.56 | 39.0 | 3.20e-01 | 82.2% | 42.4% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 41.0 | 3.74e-01 | 81.1% | 77.6% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 40.0 | 3.44e-01 | 80.0% | 73.5% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 39.0 | 4.15e-01 | 91.1% | 87.5% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.74e-01 | 85.6% | 74.7% |
| 3akjA01 | 3.30.200.120 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.52 | 30.0 | 3.27e-01 | 98.9% | 68.9% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 37.0 | 3.29e-01 | 77.8% | 84.5% |
| 3s95A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 32.0 | 3.30e-01 | 100.0% | 64.8% |
| 1attA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.51 | 35.0 | 3.06e-01 | 72.2% | 92.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3975793 | 4312.1.1.5 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › RelE | 0.66 | 40.0 | 3.95e-01 | 81.1% | 56.8% |
| 5066585 | 881.2.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like | 0.66 | 41.0 | 3.62e-01 | 81.1% | 43.1% |
| 3704328 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.64 | 43.0 | 4.43e-01 | 100.0% | 74.7% |
| 5055383 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.64 | 39.0 | 3.24e-01 | 97.8% | 35.0% |
| 3199626 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.64 | 47.0 | 3.06e-01 | 87.8% | 16.9% |
| 1954213 | 241.1.1.6 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › YbjN | 0.63 | 48.0 | 4.10e-01 | 81.1% | 69.0% |
| 2581025 | 59.1.1.1 ↗ | beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › RPC5 | 0.59 | 42.0 | 3.77e-01 | 74.4% | 64.1% |
| 3981185 | 241.1.1.25 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF27378 | 0.58 | 44.0 | 4.11e-01 | 81.1% | 75.7% |
| 5027648 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.58 | 34.0 | 3.54e-01 | 100.0% | 61.2% |
| 3735902 | 881.1.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 | 0.57 | 42.0 | 3.33e-01 | 80.0% | 51.8% |
| 3725227 | 519.1.1.1 ↗ | a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS | 0.56 | 40.0 | 4.19e-01 | 92.2% | 85.0% |
| 5062674 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 4.12e-01 | 83.3% | 97.1% |
| 4025870 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 31.0 | 3.35e-01 | 98.9% | 64.0% |
| 3607152 | 3407.1.1.1 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › NOP5NT | 0.55 | 46.0 | 3.78e-01 | 93.3% | 64.2% |
| 3614187 | 241.6.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › P34-Arc | 0.54 | 41.0 | 3.34e-01 | 81.1% | 66.9% |
| 3199320 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 41.0 | 3.81e-01 | 82.2% | 75.7% |
| 3450225 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 37.0 | 2.58e-01 | 90.0% | 20.6% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.53 | 42.0 | 3.56e-01 | 100.0% | 51.3% |
| 3236594 | 312.1.1.19 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 | 0.52 | 41.0 | 3.38e-01 | 85.6% | 91.8% |
| 3593907 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 47.0 | 3.24e-01 | 100.0% | 45.5% |
| 3787819 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 37.0 | 3.56e-01 | 84.4% | 65.7% |
| 3262446 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.51 | 36.0 | 3.58e-01 | 100.0% | 72.0% |
| 5025383 | 304.165.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › Ta1207 | 0.50 | 38.0 | 3.24e-01 | 82.2% | 91.6% |
| 3514839 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.50 | 41.0 | 3.47e-01 | 88.9% | 94.7% |