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IMGVR_UViG_3300023502_000007-3300023502-Ga0257054_10042876

Arc-Vir

IMGVR_UViG_3300023502_000007-3300023502-Ga0257054_10042876

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-56
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ez2A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 59.0 3.67e-01 83.6% 92.1%
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.67 45.0 3.39e-01 70.9% 52.1%
5t05B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 54.0 3.36e-01 87.3% 90.9%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.63 50.0 3.69e-01 87.3% 51.7%
8befJ01 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.61 45.0 3.11e-01 78.2% 67.6%
7cyuA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.61 38.0 3.84e-01 70.9% 61.4%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4287265 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.64 48.0 3.15e-01 80.0% 45.8%
3599404 650.1.1.0 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.60 46.0 3.79e-01 83.6% 47.0%