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IMGVR_UViG_3300024252_000059-3300024252-Ga0233435_10009957
Arc-VirIMGVR_UViG_3300024252_000059-3300024252-Ga0233435_10009957
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-39_52-82
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iajA00 | 3.30.1490.390 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 | 0.68 | 41.0 | 3.72e-01 | 81.5% | 43.4% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.63 | 56.0 | 5.09e-01 | 100.0% | 94.4% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.56 | 40.0 | 3.25e-01 | 75.9% | 79.6% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 35.0 | 3.37e-01 | 83.3% | 52.3% |
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.55 | 41.0 | 3.46e-01 | 81.5% | 50.5% |
| 3demA03 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.54 | 39.0 | 3.18e-01 | 81.5% | 94.7% |
| 1iowA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 33.0 | 2.50e-01 | 79.6% | 22.8% |
| 3qqnA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.39e-01 | 92.6% | 90.5% |
| 1hi9A02 | 3.30.1360.130 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein | 0.53 | 38.0 | 3.42e-01 | 77.8% | 64.5% |
| 2q1mA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 36.0 | 3.03e-01 | 81.5% | 96.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3724748 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.64 | 48.0 | 3.67e-01 | 79.6% | 70.8% |
| 3229165 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.63 | 56.0 | 4.75e-01 | 100.0% | 65.9% |
| 3635947 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 49.0 | 3.75e-01 | 98.1% | 42.3% |
| 3852562 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.57 | 50.0 | 3.07e-01 | 98.1% | 16.1% |
| 3855572 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 40.0 | 3.03e-01 | 75.9% | 30.4% |
| 3258986 | 101.1.11.112 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › SGT1 | 0.51 | 37.0 | 2.51e-01 | 77.8% | 99.0% |
| 3661533 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.51 | 45.0 | 4.14e-01 | 100.0% | 77.1% |
| 3471529 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.50 | 37.0 | 3.92e-01 | 85.2% | 100.0% |