←Back to structures
IMGVR_UViG_3300024252_000257-3300024252-Ga0233435_10062229
Arc-VirIMGVR_UViG_3300024252_000257-3300024252-Ga0233435_10062229
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-136
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p1mB01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.66 | 22.0 | 3.44e-01 | 99.1% | 73.3% |
| 1ra6A02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.58 | 33.0 | 3.40e-01 | 88.2% | 55.7% |
| 2y3mA02 | 3.30.1370.130 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 29.0 | 3.71e-01 | 88.2% | 89.3% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.55 | 24.0 | 3.24e-01 | 91.8% | 78.2% |
| 2gutA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.55 | 33.0 | 3.73e-01 | 78.2% | 81.8% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.53 | 46.0 | 3.38e-01 | 98.2% | 68.9% |
| 2jugA01 | 1.10.10.1830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain | 0.53 | 25.0 | 3.21e-01 | 71.8% | 81.8% |
| 1hh5A00 | 3.90.10.10 | Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 | 0.52 | 30.0 | 3.54e-01 | 88.2% | 89.7% |
| 6gpxB00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 40.0 | 3.06e-01 | 84.5% | 68.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4392601 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.61 | 32.0 | 3.77e-01 | 88.2% | 74.0% |
| 4543273 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.57 | 32.0 | 3.81e-01 | 92.7% | 87.7% |
| 5069558 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 24.0 | 3.35e-01 | 71.8% | 88.9% |
| 4598960 | 304.36.1.0 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like | 0.56 | 30.0 | 3.56e-01 | 85.5% | 77.1% |
| 2035461 | 3380.1.1.1 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Lsr2 | 0.56 | 24.0 | 3.25e-01 | 91.8% | 76.8% |
| 3276262 | 304.36.1.2 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › RVT_1 | 0.55 | 34.0 | 3.55e-01 | 90.9% | 64.8% |
| 3564195 | 327.11.2.46 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_PARP14_4 | 0.54 | 28.0 | 3.41e-01 | 87.3% | 81.5% |
| 3648830 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.54 | 35.0 | 3.86e-01 | 79.1% | 84.7% |
| 3878887 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 42.0 | 3.09e-01 | 85.5% | 62.7% |
| 4410774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.52 | 31.0 | 3.08e-01 | 97.3% | 55.7% |
| 4952765 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.51 | 32.0 | 2.97e-01 | 98.2% | 47.9% |
| 4636695 | 304.36.1.1 ↗ | a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 | 0.51 | 26.0 | 3.13e-01 | 78.2% | 75.0% |
| 4422597 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 39.0 | 2.88e-01 | 85.5% | 59.4% |