IMGVR_UViG_3300024252_001273-3300024252-Ga0233435_100111034

Arc-Vir

Identity

96.1 mean pLDDT

View cluster (5 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 40-147_201-242

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF08889.17 best	WbqC	69.8	4.40e-19	74.0%	48.2%
PF08889.17	WbqC	24.8	2.60e-05	22.7%	13.8%

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3b9qA01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.60	33.0	4.08e-01	89.3%	88.8%
2yhsA01	1.20.120.140	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain	0.59	32.0	3.85e-01	90.0%	80.4%
2cdqA02	1.20.120.1320	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain	0.58	36.0	4.40e-01	80.0%	96.9%
2qupA00	1.20.120.490	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain	0.55	39.0	4.29e-01	81.3%	89.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5048210	2005.1.1.39 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › WbqC	0.90	77.0	6.66e-01	88.7%	82.8%
5057063	2005.1.1.39 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › WbqC	0.89	79.0	6.73e-01	91.3%	83.2%
4457401	2005.1.1.39 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › WbqC	0.87	81.0	6.82e-01	96.7%	83.0%
4958285	2005.1.1.39 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › WbqC	0.86	74.0	6.40e-01	88.7%	82.8%