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IMGVR_UViG_3300024257_000634-3300024257-Ga0233442_10073963
Arc-VirIMGVR_UViG_3300024257_000634-3300024257-Ga0233442_10073963
Identity
- Kingdom:
- archaea
Quality
81.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 864-938
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kvzA00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.50 | 41.0 | 3.68e-01 | 90.7% | 74.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3710370 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.56 | 45.0 | 3.15e-01 | 92.0% | 84.9% |
| 3982482 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.53 | 32.0 | 3.04e-01 | 82.7% | 50.0% |
| 5006116 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.50 | 39.0 | 2.61e-01 | 88.0% | 95.7% |
D2
medium
residues 31-86_107-135
Domain cluster:
representative
D3
medium
residues 87-106_136-273
D4
medium
residues 274-341
D5
medium
residues 547-720
Domain cluster:
rep: BML_08012017_9_75m_scaffold_2_prodigal-single.1__X__X__00068__D652-895
D6
medium
residues 721-841
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00104__D408-487