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IMGVR_UViG_3300024258_000357-3300024258-Ga0233440_10074192
Arc-VirIMGVR_UViG_3300024258_000357-3300024258-Ga0233440_10074192
Identity
- Kingdom:
- archaea
Quality
75.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-44
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01555.25 best | N6_N4_Mtase | 34.0 | 4.10e-08 | 97.3% | 13.6% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ax6A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.80 | 54.0 | 3.85e-01 | 70.3% | 25.9% |
| 2oqrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.80 | 55.0 | 4.29e-01 | 73.0% | 37.5% |
| 2dr1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.79 | 65.0 | 3.95e-01 | 100.0% | 16.3% |
| 1mb3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.78 | 53.0 | 3.75e-01 | 73.0% | 25.6% |
| 2x5oA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.74 | 58.0 | 4.37e-01 | 89.2% | 35.9% |
| 1b6sA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.74 | 50.0 | 4.19e-01 | 73.0% | 41.4% |
| 1iugA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.72 | 55.0 | 3.50e-01 | 100.0% | 16.9% |
| 6j0yA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.70 | 49.0 | 3.66e-01 | 75.7% | 30.7% |
| 3gc6A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 55.0 | 4.12e-01 | 100.0% | 45.5% |
| 4gvlA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.70 | 54.0 | 3.86e-01 | 100.0% | 30.9% |
| 4koaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.69 | 58.0 | 4.11e-01 | 100.0% | 32.8% |
| 1mdbA01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.68 | 54.0 | 3.71e-01 | 100.0% | 26.6% |
| 2j48A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 47.0 | 3.37e-01 | 75.7% | 25.2% |
| 2b5wA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 53.0 | 3.77e-01 | 100.0% | 34.6% |
| 1np3B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 53.0 | 3.49e-01 | 100.0% | 20.3% |
| 4ea9A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.66 | 52.0 | 4.13e-01 | 97.3% | 59.6% |
| 3uenA01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.66 | 51.0 | 3.92e-01 | 89.2% | 36.7% |
| 3re1A01 | 3.40.50.10090 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 49.0 | 3.64e-01 | 100.0% | 32.8% |
| 4n40A01 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.63 | 49.0 | 3.81e-01 | 100.0% | 38.0% |
| 2k2wA00 | 3.40.50.10980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nibrin, BRCT2 domain | 0.62 | 48.0 | 3.62e-01 | 97.3% | 47.7% |
| 3zdrA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 47.0 | 3.14e-01 | 100.0% | 34.7% |
| 1vchD00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 48.0 | 3.31e-01 | 100.0% | 23.1% |
| 7lzaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 46.0 | 3.51e-01 | 100.0% | 40.7% |
| 1ao0A02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 45.0 | 3.33e-01 | 100.0% | 34.8% |
| 5fg3A03 | 3.40.50.10050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 | 0.57 | 43.0 | 3.28e-01 | 100.0% | 38.3% |
| 1kc0A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 40.0 | 2.54e-01 | 100.0% | 22.1% |
| 5dclA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 41.0 | 3.15e-01 | 97.3% | 36.8% |
| 3olcX03 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.54 | 42.0 | 3.41e-01 | 94.6% | 60.9% |
| 1vw3D00 | 3.40.1370.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L4; Chain: A; › Ribosomal protein L4/L1 | 0.54 | 38.0 | 2.57e-01 | 100.0% | 17.2% |
| 1nkiA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 40.0 | 2.78e-01 | 89.2% | 70.1% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4935085 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.92 | 82.0 | 5.18e-01 | 100.0% | 23.5% |
| 3352228 | 2003.1.5.21 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CMAS | 0.84 | 71.0 | 4.27e-01 | 100.0% | 16.2% |
| 3280855 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.82 | 55.0 | 3.59e-01 | 70.3% | 18.7% |
| 3477829 | 7568.1.1.14 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › NIBRIN_BRCT_II | 0.79 | 57.0 | 3.84e-01 | 78.4% | 23.0% |
| 4238743 | 2003.1.1.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_Gly3P_dh_N | 0.78 | 55.0 | 3.64e-01 | 78.4% | 21.9% |
| 4938928 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.76 | 61.0 | 4.20e-01 | 100.0% | 29.0% |
| 3248211 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.75 | 60.0 | 3.81e-01 | 100.0% | 19.1% |
| 143625 | 2007.1.8.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Uroporphyrinogen III synthase (U3S, HemD) | 0.74 | 52.0 | 5.21e-01 | 75.7% | 81.1% |
| 3849450 | 7568.1.1.14 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › NIBRIN_BRCT_II | 0.74 | 55.0 | 3.97e-01 | 89.2% | 28.2% |
| 4401511 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.74 | 62.0 | 4.06e-01 | 100.0% | 25.3% |
| 3621796 | 7568.1.1.20 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PF29099 | 0.74 | 53.0 | 3.81e-01 | 78.4% | 29.1% |
| 3655847 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.74 | 58.0 | 3.75e-01 | 100.0% | 21.5% |
| 3259564 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.73 | 51.0 | 4.03e-01 | 78.4% | 37.6% |
| 4938578 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.73 | 58.0 | 3.79e-01 | 100.0% | 23.8% |
| 3697509 | 7568.1.1.14 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › NIBRIN_BRCT_II | 0.73 | 54.0 | 3.76e-01 | 89.2% | 24.8% |
| 3236525 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.72 | 60.0 | 3.96e-01 | 100.0% | 24.7% |
| 3284238 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.71 | 58.0 | 4.03e-01 | 100.0% | 30.0% |
| 3926007 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.69 | 55.0 | 4.09e-01 | 94.6% | 36.2% |
| 4976916 | 2006.1.4.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › NYN | 0.69 | 55.0 | 4.03e-01 | 100.0% | 34.2% |
| 3794495 | 7568.1.1.1 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › BRCT | 0.67 | 52.0 | 3.82e-01 | 89.2% | 31.4% |
| 4965115 | 7528.1.1.3 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_III | 0.67 | 55.0 | 3.99e-01 | 100.0% | 34.8% |
| 3386579 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.65 | 53.0 | 3.65e-01 | 100.0% | 27.6% |
| 3388140 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.64 | 49.0 | 3.55e-01 | 97.3% | 33.1% |
| 4931345 | 2003.1.1.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N | 0.63 | 48.0 | 3.41e-01 | 100.0% | 26.0% |
| 5020609 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.63 | 48.0 | 3.37e-01 | 100.0% | 28.4% |
| 5021401 | 2007.1.2.59 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF1638 | 0.62 | 48.0 | 3.03e-01 | 100.0% | 15.8% |
| 4990808 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.62 | 47.0 | 3.04e-01 | 100.0% | 16.0% |
| 4932363 | 2007.6.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain | 0.60 | 46.0 | 3.12e-01 | 100.0% | 22.9% |
| 4085516 | 2003.1.8.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N | 0.60 | 45.0 | 3.56e-01 | 97.3% | 37.0% |
| 4957650 | 2003.1.8.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like | 0.59 | 42.0 | 3.44e-01 | 100.0% | 36.7% |
| 4935255 | 2003.1.8.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like | 0.57 | 42.0 | 3.68e-01 | 100.0% | 48.0% |