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IMGVR_UViG_3300024258_000357-3300024258-Ga0233440_10074194
Arc-VirIMGVR_UViG_3300024258_000357-3300024258-Ga0233440_10074194
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-89
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3plwA00 | 3.30.40.190 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.82 | 76.0 | 6.85e-01 | 100.0% | 92.7% |
| 3g27A01 | 3.30.50.20 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › prophage-derive protein ybcO | 0.69 | 48.0 | 5.35e-01 | 80.7% | 92.4% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.67 | 51.0 | 5.15e-01 | 80.7% | 86.7% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.63 | 47.0 | 3.98e-01 | 80.7% | 59.9% |
| 1iq0A02 | 3.30.1360.70 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Arginyl tRNA synthetase N-terminal domain | 0.59 | 43.0 | 4.04e-01 | 100.0% | 63.0% |
| 2mw8A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 29.0 | 3.19e-01 | 81.9% | 59.7% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.54 | 32.0 | 3.32e-01 | 85.5% | 60.0% |
| 2gloA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 28.0 | 3.19e-01 | 83.1% | 67.8% |
| 2owaA01 | 1.10.220.150 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Arf GTPase activating protein | 0.51 | 42.0 | 3.78e-01 | 91.6% | 92.5% |
| 3m8jA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.50 | 35.0 | 3.46e-01 | 98.8% | 67.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3978374 | 378.1.1.18 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › DUF968 | 0.82 | 76.0 | 7.53e-01 | 98.8% | 96.5% |
| 2485694 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.66 | 57.0 | 4.85e-01 | 94.0% | 62.7% |
| 4949181 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.66 | 52.0 | 5.47e-01 | 84.3% | 96.0% |
| 3201871 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.66 | 57.0 | 4.29e-01 | 94.0% | 81.5% |
| 2449258 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.65 | 58.0 | 4.68e-01 | 100.0% | 84.8% |
| 3977110 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.65 | 49.0 | 4.92e-01 | 80.7% | 97.6% |
| 1144783 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.65 | 58.0 | 4.67e-01 | 100.0% | 68.8% |
| 5039655 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.64 | 52.0 | 5.36e-01 | 86.7% | 96.2% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.64 | 54.0 | 4.94e-01 | 92.8% | 72.7% |
| 4999440 | 378.1.1.27 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_5 | 0.63 | 54.0 | 5.44e-01 | 100.0% | 92.9% |
| 4979945 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.63 | 49.0 | 4.30e-01 | 83.1% | 65.6% |
| 4986026 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.63 | 48.0 | 3.70e-01 | 81.9% | 40.0% |
| 4492949 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.62 | 57.0 | 5.23e-01 | 100.0% | 96.2% |
| 3955812 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.62 | 54.0 | 5.19e-01 | 95.2% | 95.7% |
| 3952384 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.62 | 53.0 | 5.10e-01 | 95.2% | 93.7% |
| 3952923 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.61 | 53.0 | 5.02e-01 | 95.2% | 91.0% |
| 119462 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.61 | 47.0 | 3.97e-01 | 83.1% | 58.5% |
| 5016552 | 378.1.1.10 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_4 | 0.60 | 51.0 | 4.71e-01 | 98.8% | 73.6% |
| 3561303 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.59 | 51.0 | 4.16e-01 | 98.8% | 80.6% |
| 3209207 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.58 | 51.0 | 4.11e-01 | 96.4% | 75.9% |
| 3238348 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 40.0 | 3.23e-01 | 73.5% | 44.0% |
| 4270618 | 228.1.1.1 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Sod_Fe_C | 0.55 | 32.0 | 2.99e-01 | 85.5% | 42.7% |
| 4442301 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 28.0 | 3.37e-01 | 83.1% | 78.0% |
| 3739407 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.54 | 31.0 | 3.19e-01 | 81.9% | 56.2% |
| 4025339 | 376.1.1.15 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-Nse | 0.53 | 34.0 | 3.35e-01 | 83.1% | 56.8% |