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IMGVR_UViG_3300024259_000179-3300024259-Ga0233437_100344130
Arc-VirIMGVR_UViG_3300024259_000179-3300024259-Ga0233437_100344130
Identity
- Kingdom:
- archaea
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-57
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.62 | 46.0 | 3.68e-01 | 81.5% | 85.2% |
| 6rxpA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.60 | 50.0 | 4.30e-01 | 100.0% | 61.1% |
| 2b4yA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.59 | 48.0 | 4.01e-01 | 100.0% | 69.4% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 43.0 | 3.80e-01 | 81.5% | 81.9% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.57 | 41.0 | 4.06e-01 | 81.5% | 79.3% |
| 2kkcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 40.0 | 3.39e-01 | 79.6% | 85.0% |
| 2hjhA02 | 3.30.1600.10 | Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' | 0.56 | 44.0 | 3.63e-01 | 100.0% | 56.6% |
| 3laaA00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.55 | 40.0 | 2.88e-01 | 75.9% | 32.0% |
| 1w36B03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 2.36e-01 | 75.9% | 58.9% |
| 4gnfA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 36.0 | 3.14e-01 | 74.1% | 46.9% |
| 4kdyB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 37.0 | 3.32e-01 | 81.5% | 73.8% |
| 2wtvA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 38.0 | 2.75e-01 | 85.2% | 57.1% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4970593 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.65 | 38.0 | 2.45e-01 | 81.5% | 12.4% |
| 3470130 | 219.1.1.81 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › MINDY-3_4_CD | 0.65 | 49.0 | 3.06e-01 | 83.3% | 32.1% |
| 3741919 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 46.0 | 3.88e-01 | 81.5% | 48.0% |
| 4077806 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.62 | 43.0 | 2.96e-01 | 79.6% | 19.5% |
| 4015771 | 210.1.4.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase | 0.62 | 47.0 | 2.92e-01 | 85.2% | 13.4% |
| 4237725 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.59 | 44.0 | 3.30e-01 | 81.5% | 67.9% |
| 4287884 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.59 | 45.0 | 3.35e-01 | 85.2% | 65.8% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.59 | 45.0 | 3.54e-01 | 81.5% | 39.1% |
| 4463557 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 42.0 | 3.65e-01 | 81.5% | 47.4% |
| 3472069 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.57 | 39.0 | 3.62e-01 | 79.6% | 55.7% |
| 3593442 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 40.0 | 3.38e-01 | 79.6% | 68.6% |
| 4992142 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.56 | 47.0 | 3.06e-01 | 100.0% | 45.7% |
| 3388241 | 1056.1.1.0 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain | 0.56 | 43.0 | 3.09e-01 | 85.2% | 72.9% |
| 3314030 | 386.1.1.74 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-Di19 | 0.55 | 38.0 | 3.79e-01 | 85.2% | 68.3% |
| 3777935 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.55 | 40.0 | 2.64e-01 | 83.3% | 40.3% |
| 3689283 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.55 | 41.0 | 3.50e-01 | 88.9% | 48.4% |
| 5029796 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.54 | 34.0 | 2.70e-01 | 83.3% | 28.3% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 38.0 | 3.23e-01 | 81.5% | 39.1% |
| 5022335 | 1.1.2.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PolC_DP2_central | 0.53 | 39.0 | 2.68e-01 | 81.5% | 43.2% |
| 4994739 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.52 | 41.0 | 2.90e-01 | 88.9% | 98.4% |
| 4948126 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.52 | 40.0 | 2.92e-01 | 88.9% | 64.0% |
| 5081618 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.51 | 39.0 | 3.02e-01 | 81.5% | 36.7% |
| 4939751 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 39.0 | 2.82e-01 | 88.9% | 36.8% |
| 3274487 | 605.1.1.155 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Gpi1 | 0.51 | 42.0 | 2.84e-01 | 87.0% | 40.6% |
| 4960658 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 40.0 | 2.94e-01 | 88.9% | 64.2% |
| 3815248 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.51 | 34.0 | 2.32e-01 | 70.4% | 16.7% |
| 3289029 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 40.0 | 2.76e-01 | 88.9% | 54.6% |
| 4928815 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 37.0 | 3.63e-01 | 87.0% | 78.5% |
| 3483069 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 31.0 | 3.31e-01 | 74.1% | 68.9% |
| 3648472 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.50 | 36.0 | 2.52e-01 | 81.5% | 39.0% |
D2
medium
residues 71-105
Domain cluster:
representative